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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CGGAGTTCGTGATCAATTATATAATTTGCAGATGCTTGAGGCAGCTCACCTCAAACTTCCACAACCTAAGGACTCAGAACGTCCTAGGACCTATACTCCTgtatgctttcttggttttagtaatcctcatttttattgaatactctgttatctataatataagattataagaccattttttcccttggttttggttatgtag

Basic information

species Glycine max
transcript GLYMA02G07830.1
intron # 14
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|208072518|gb|GD869806.1|GD869806
EST:     TCAAACTTCCACAACCTAAGGACTCAGAACGTCCTAGGACCTATACTCCT                         AAACACCCTACGATAACACCTCCTAGTTTTCCTACAAAGTAACAAGGCTCC
genomic: TCAAACTTCCACAACCTAAGGACTCAGAACGTCCTAGGACCTATACTCCTgtatgctttc ... ggttatgtagAAACACCCTACGATAACACCTCCTAGTTTTCCT-CAA-GTA-CA-GGCTCC
EST: gi|193418229|gb|FK383475.1|FK383475
EST:     TCAAACTTCCACAACCTAAGGACTCAGAACGTCCTAGGACCTATACTCCT                         AAACACCCTACGATAACACCTCCTAGTTTTCCTCAAGTACAGGCTCCTATT
genomic: TCAAACTTCCACAACCTAAGGACTCAGAACGTCCTAGGACCTATACTCCTgtatgctttc ... ggttatgtagAAACACCCTACGATAACACCTCCTAGTTTTCCTCAAGTACAGGCTCCTATT
EST: gi|208230983|gb|GE033102.1|GE033102
EST:     TCAAACTTCCACAACCTAAGGACTCAGAACGTCCTAGGACCTATACTCCT                         AAACACCCTATGATAACACCTCCTAGTTTTCCTCAAGTACAGGCTCCTATT
genomic: TCAAACTTCCACAACCTAAGGACTCAGAACGTCCTAGGACCTATACTCCTgtatgctttc ... ggttatgtagAAACACCCTACGATAACACCTCCTAGTTTTCCTCAAGTACAGGCTCCTATT
EST: gi|193602394|gb|FK556291.1|FK556291
EST:     TCAAACTTCCGCAACCTAAGGACTCAGAACGTCCTAGGACCTATACTCCT                         AAACACCCTACGATAACACCTCCTAGTTTTCCTCAAGTACAGGCTCCTATT
genomic: TCAAACTTCCACAACCTAAGGACTCAGAACGTCCTAGGACCTATACTCCTgtatgctttc ... ggttatgtagAAACACCCTACGATAACACCTCCTAGTTTTCCTCAAGTACAGGCTCCTATT
EST: gi|254336764|gb|GR842943.1|GR842943
EST:     TCAAACTTCCACAACCTAAGGACTCAGAACGTCCTAGGACCTATACTCCT                         AAACACCCTACGATAACACCTCCTAGTTTTCCTCAAGTACAGGCTCCTATT
genomic: TCAAACTTCCACAACCTAAGGACTCAGAACGTCCTAGGACCTATACTCCTgtatgctttc ... ggttatgtagAAACACCCTACGATAACACCTCCTAGTTTTCCTCAAGTACAGGCTCCTATT