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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GCTGATGAGGAAGAGGAAGATGCTGATGAAGCTGGCAATGACTCCGATGCTGAATCAAAGACGGAAGCTGGGGAAGACACCAAGGAAGAGGGTGTACATgtaagtttttccatcccctcctcagtatctcattttaatcaagcttggcaacaatgtatttaataattcttcccgttttatttgcag

Basic information

species Glycine max
transcript GLYMA20G23080.2
intron # 13
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|31474449|gb|CD416477.1|CD416477
EST:     CTGAATCAAAGACGGAAGCTGGAGAAGACACCAAGGAAGAGGGTGTACAT                         GATGAACTCTAGGAAGTTTGCCAAACGGATAAAGAGTGAGCGGAAGTTATA
genomic: CTGAATCAAAGACGGAAGCTGGGGAAGACACCAAGGAAGAGGGTGTACATgtaagttttt ... ttatttgcagGATGAACTCTAGGAAGTTTGCAAAACGGATAAAGAGTGAGCGGAAGTTATA
EST: gi|13482210|gb|BG511553.1|BG511553
EST:     CTGAATCAAAGACGGAAGCTGGGGAAGACACCAAGGAAGAGGGTGTACAT                         GATGAACTCTAGGAAGTTTGCAAAACGGATAAAGAGTGAGCGGAAGTTATA
genomic: CTGAATCAAAGACGGAAGCTGGGGAAGACACCAAGGAAGAGGGTGTACATgtaagttttt ... ttatttgcagGATGAACTCTAGGAAGTTTGCAAAACGGATAAAGAGTGAGCGGAAGTTATA
EST: gi|254348439|gb|GR852118.1|GR852118
EST:     CTGAATCAAAGACGGAAGCTGGGGAAGACACCAAGGAAGAGGGTGTACAT                         GATGAACTCTAGGAAGTTTGCAAAACGGATAAAGAGTGAGCGGAAGTTATA
genomic: CTGAATCAAAGACGGAAGCTGGGGAAGACACCAAGGAAGAGGGTGTACATgtaagttttt ... ttatttgcagGATGAACTCTAGGAAGTTTGCAAAACGGATAAAGAGTGAGCGGAAGTTATA
EST: gi|9440151|gb|BE440661.1|BE440661
EST:     CTGAATCAAAGACGGAAGCTGGGGAAGACACCAAGGAAGAGGGTGTACAT                         GATGAACTCTAGGAAGTTTGCAAAACGGATAAAGAGTGAGCGGAAGTTATA
genomic: CTGAATCAAAGACGGAAGCTGGGGAAGACACCAAGGAAGAGGGTGTACATgtaagttttt ... ttatttgcagGATGAACTCTAGGAAGTTTGCAAAACGGATAAAGAGTGAGCGGAAGTTATA
EST: gi|207785021|gb|GD756098.1|GD756098
EST:     CTGAATCAAAGACGGAAGCTGGGGAAGACACCAAGGAAGAGGGTGTACAT                         GATGAACTCTAGGAAGTTTGCAAAACGGATAAAGAGTGAGCGGAAGTTATA
genomic: CTGAATCAAAGACGGAAGCTGGGGAAGACACCAAGGAAGAGGGTGTACATgtaagttttt ... ttatttgcagGATGAACTCTAGGAAGTTTGCAAAACGGATAAAGAGTGAGCGGAAGTTATA
EST: gi|7925290|gb|AW831316.1|AW831316
EST:     CTGAATCAAAGACGGAAGCTGGGGAAGACACCAAGGAAGAGGGTGTACAT                         GATGAACTCTAGGAAGTTTGCAAAACGGATAAAGAGTGAGCGGAAGTTATA
genomic: CTGAATCAAAGACGGAAGCTGGGGAAGACACCAAGGAAGAGGGTGTACATgtaagttttt ... ttatttgcagGATGAACTCTAGGAAGTTTGCAAAACGGATAAAGAGTGAGCGGAAGTTATA
EST: gi|31469544|gb|CD411572.1|CD411572
EST:     CTGAATCAAAGACGGAAGCTGGAGAAGACACCAAGGAAGAGGGTGTACAT                         GATGAACTCTAGGAAGTTTGCAAAACGGATAAAGAGTGAGCGGAAGTTATA
genomic: CTGAATCAAAGACGGAAGCTGGGGAAGACACCAAGGAAGAGGGTGTACATgtaagttttt ... ttatttgcagGATGAACTCTAGGAAGTTTGCAAAACGGATAAAGAGTGAGCGGAAGTTATA
EST: gi|31311102|gb|CD396305.1|CD396305
EST:     CTGAATCAAAGACGGAAGCTGGAGAAGACACCAAGGAAGAGGGTGTACAT                         GATGAACTCTAGGAAGTTTGCAAAACGGATAAAGAGTGAGCGGAAGTTATA
genomic: CTGAATCAAAGACGGAAGCTGGGGAAGACACCAAGGAAGAGGGTGTACATgtaagttttt ... ttatttgcagGATGAACTCTAGGAAGTTTGCAAAACGGATAAAGAGTGAGCGGAAGTTATA
EST: gi|208254222|gb|GE051692.1|GE051692
EST:     CTGAATCAAAGACGGAAGCTGGGGAAGACACCAAGGAAGAGGGTGTACAT                         GATGAACTCTAGGAAGTTTGCAA
genomic: CTGAATCAAAGACGGAAGCTGGGGAAGACACCAAGGAAGAGGGTGTACATgtaagttttt ... ttatttgcagGATGAACTCTAGGAAGTTTGCAA
EST: gi|193670428|gb|FK611544.1|FK611544
EST:     GGAAGAGGGTGTACGT                         GATGAACTCTAGGAAGTTTGCAAAACGGATAAAGAGTGAGCGGAAGTTATA
genomic: GGAAGAGGGTGTACATgtaagttttt ... ttatttgcagGATGAACTCTAGGAAGTTTGCAAAACGGATAAAGAGTGAGCGGAAGTTATA
EST: gi|193436947|gb|FK402576.1|FK402576
EST:     CTGAATCAAAGACGGAAGCTGGGGAAGACACCAAGGAAGAGGGTGTACAC                         GATGAACTCTAGGAAGTTTGCAAAACGGATAAAGAGTGAGCGGAAGTTATA
genomic: CTGAATCAAAGACGGAAGCTGGGGAAGACACCAAGGAAGAGGGTGTACATgtaagttttt ... ttatttgcagGATGAACTCTAGGAAGTTTGCAAAACGGATAAAGAGTGAGCGGAAGTTATA
EST: gi|213597276|gb|DB977751.1|DB977751
EST:     CTGAATCAAAGACGGAAGCTGGGGAAGACACCAAGGAAGAGGGTGTACAT                         GATGAACTCTAGGAAGTTTGCAAAACGGATAAAGAGTGAGCGGAAGTTATA
genomic: CTGAATCAAAGACGGAAGCTGGGGAAGACACCAAGGAAGAGGGTGTACATgtaagttttt ... ttatttgcagGATGAACTCTAGGAAGTTTGCAAAACGGATAAAGAGTGAGCGGAAGTTATA
EST: gi|10710593|gb|BF010311.1|BF010311
EST:     CTGAATCAAAGACGGAAGCTGGGGAAGACACCAAGGAAGAGGGTGTACAT                         GATGAACTCTAGGAAGTTTGCAAAACGGATAAAGAGTGAGCGGAAGTTATA
genomic: CTGAATCAAAGACGGAAGCTGGGGAAGACACCAAGGAAGAGGGTGTACATgtaagttttt ... ttatttgcagGATGAACTCTAGGAAGTTTGCAAAACGGATAAAGAGTGAGCGGAAGTTATA
EST: gi|213591613|gb|DB975302.1|DB975302
EST:     CTGAATCAAAGACGGAAGCTGGGGAAGACACCAAGGAAGAGGGTGTACAT                         GATGAACTCTAGGAAGTTTGCAAAACGGATAAAGAGTGAGCGGAAGTTATA
genomic: CTGAATCAAAGACGGAAGCTGGGGAAGACACCAAGGAAGAGGGTGTACATgtaagttttt ... ttatttgcagGATGAACTCTAGGAAGTTTGCAAAACGGATAAAGAGTGAGCGGAAGTTATA
EST: gi|58021776|gb|CX708517.1|CX708517
EST:     CTGAATCAAAGACGGAAGCTGGGGAAGACACCAAGGAAGAGGGTGTACAT                         GATGAACTCTAGGAAGTTTGCAAAACGGATAAAGAGTGAGCGGAAGTTATA
genomic: CTGAATCAAAGACGGAAGCTGGGGAAGACACCAAGGAAGAGGGTGTACATgtaagttttt ... ttatttgcagGATGAACTCTAGGAAGTTTGCAAAACGGATAAAGAGTGAGCGGAAGTTATA
EST: gi|213596806|gb|DB978038.1|DB978038
EST:     CTGAATCAAAGACGGAAGCTGGGGAAGACACCAAGGAAGAGGGTGTACAT                         GATGAACTCTAGGAAGTTTGCAAAACGGATAAAGAGTGAGCGGAAGTTATA
genomic: CTGAATCAAAGACGGAAGCTGGGGAAGACACCAAGGAAGAGGGTGTACATgtaagttttt ... ttatttgcagGATGAACTCTAGGAAGTTTGCAAAACGGATAAAGAGTGAGCGGAAGTTATA
EST: gi|192307920|gb|FK003068.1|FK003068
EST:     CTGAATCAAAGACGGAAGCTGGAGAAGACACCAAGGAAGAGGGTGTACAT                         GATGAACTCTAGGAAGTTTGCAAAACGGATAAAGAGTGAGCGGAAGTTATA
genomic: CTGAATCAAAGACGGAAGCTGGGGAAGACACCAAGGAAGAGGGTGTACATgtaagttttt ... ttatttgcagGATGAACTCTAGGAAGTTTGCAAAACGGATAAAGAGTGAGCGGAAGTTATA
EST: gi|254340601|gb|GR850903.1|GR850903
EST:     CTGAATCAAAGACGGAAGCTGGGGAAGACACCAAGGAAGAGGGTGTACAT                         GATGAACTCTAGGAAGTTTGCAAAACGGATAAAGAGTGAGCGGAAGTTATA
genomic: CTGAATCAAAGACGGAAGCTGGGGAAGACACCAAGGAAGAGGGTGTACATgtaagttttt ... ttatttgcagGATGAACTCTAGGAAGTTTGCAAAACGGATAAAGAGTGAGCGGAAGTTATA
EST: gi|209698332|gb|BW678063.1|BW678063
EST:     CTGAATCAAAGACGGAAGCTGGGGAAGACACCAAGGAAGAGGGTGTACAT                         GATGAACTCTAGGAAGTTTGCAAAACGGATAAAGAGTGAGCGGAAGTTATA
genomic: CTGAATCAAAGACGGAAGCTGGGGAAGACACCAAGGAAGAGGGTGTACATgtaagttttt ... ttatttgcagGATGAACTCTAGGAAGTTTGCAAAACGGATAAAGAGTGAGCGGAAGTTATA
EST: gi|209711758|gb|BW678940.1|BW678940
EST:     CTGAATCAAAGACGGAAGCTGGGGAAGACACCAAGGAAGAGGGTGTACAT                         GATGAACTCTAGGAAGTTTGCAAAACGGATAAAGAGTGAGCGGAAGTTATA
genomic: CTGAATCAAAGACGGAAGCTGGGGAAGACACCAAGGAAGAGGGTGTACATgtaagttttt ... ttatttgcagGATGAACTCTAGGAAGTTTGCAAAACGGATAAAGAGTGAGCGGAAGTTATA
EST: gi|6913341|gb|AW394871.1|AW394871
EST:     CTGAATCAAAGACGGAAGCTGGGGAAGACACCAAGGAAGAGGGTGTACAT                         GATGAACTCTAGGAAGTTTGCAAAACGGATAAAGAGTGAGCGGAAGTTATA
genomic: CTGAATCAAAGACGGAAGCTGGGGAAGACACCAAGGAAGAGGGTGTACATgtaagttttt ... ttatttgcagGATGAACTCTAGGAAGTTTGCAAAACGGATAAAGAGTGAGCGGAAGTTATA
EST: gi|16997164|gb|BM086536.1|BM086536
EST:     CTGAATCAAAGACGGAAGCTGGAGAAGACACCAAGGAAGAGGGTGTACAT                         GATGAACTCTAGGAAGTTTGCAAAACGGATAAAGAGTGAGCGGAAGTTATA
genomic: CTGAATCAAAGACGGAAGCTGGGGAAGACACCAAGGAAGAGGGTGTACATgtaagttttt ... ttatttgcagGATGAACTCTAGGAAGTTTGCAAAACGGATAAAGAGTGAGCGGAAGTTATA
EST: gi|6915349|gb|AW396879.1|AW396879
EST:     CTGAATCAAAGACGGAAGCTGGGGAAGACACCAAGGAAGAGGGTGTACAT                         GATGAACTCTAGGAAGTTTG
genomic: CTGAATCAAAGACGGAAGCTGGGGAAGACACCAAGGAAGAGGGTGTACATgtaagttttt ... ttatttgcagGATGAACTCTAGGAAGTTTG
EST: gi|31455934|gb|CD397962.1|CD397962
EST:     CTGAATCAAAGACGGAAGCTGGAGAAGACACCAAGGAAGAGGGTGTACAT                         GATGAACTCTAGGAAGTTTGCAAAACGGATAAAGAGTGAGCGGAAGTTATA
genomic: CTGAATCAAAGACGGAAGCTGGGGAAGACACCAAGGAAGAGGGTGTACATgtaagttttt ... ttatttgcagGATGAACTCTAGGAAGTTTGCAAAACGGATAAAGAGTGAGCGGAAGTTATA
EST: gi|5126765|gb|AI748501.1|AI748501
EST:     CTGAATCAAAGACGGAAGCTGNGGAAGACACCAAGGAAGAGGGTGTACAT                         GATGAACTCTAGGAAGTTTGCAAAACGGATAAAGAGTGAGC
genomic: CTGAATCAAAGACGGAAGCTGGGGAAGACACCAAGGAAGAGGGTGTACATgtaagttttt ... ttatttgcagGATGAACTCTAGGAAGTTTGCAAAACGGATAAAGAGTGAGC
EST: gi|207745658|gb|GD714990.1|GD714990
EST:     GGAAGAGGGTGTACAT                         GATGAACTCTAGGAAGTTTGCAAAACGGATAAAGAGTGAGCGGAAGTTATA
genomic: GGAAGAGGGTGTACATgtaagttttt ... ttatttgcagGATGAACTCTAGGAAGTTTGCAAAACGGATAAAGAGTGAGCGGAAGTTATA
EST: gi|6914827|gb|AW396357.1|AW396357
EST:     CTGAATCAAAGACGGAAGCTGGGGAAGACACCAAGGAAGAGGGTGTACAT                         GATGAACTCTAGGAAGTTTGCAAAACGGATAAAGAGTGAGCGGAAGTTATA
genomic: CTGAATCAAAGACGGAAGCTGGGGAAGACACCAAGGAAGAGGGTGTACATgtaagttttt ... ttatttgcagGATGAACTCTAGGAAGTTTGCAAAACGGATAAAGAGTGAGCGGAAGTTATA
EST: gi|207797867|gb|GD770909.1|GD770909
EST:     CTGAATCAAAGACGGAAGCTGGGGAAGACACCAAGGAAGAGGGTGTACAT                         GATGAACTCTAGGAAGTTTGCAAAACGGATAAAGAGTGAGCGGAAGTTATA
genomic: CTGAATCAAAGACGGAAGCTGGGGAAGACACCAAGGAAGAGGGTGTACATgtaagttttt ... ttatttgcagGATGAACTCTAGGAAGTTTGCAAAACGGATAAAGAGTGAGCGGAAGTTATA
EST: gi|254332430|gb|GR843907.1|GR843907
EST:     CTGAATCAAAGACGGAAGCTGGGGAAGACACCAAGGAAGAGGGTGTACAT                         GATGAACTCTAGGAAGTTTGCAAAACGGATAAAGAGTGAGCGGAAGTTATA
genomic: CTGAATCAAAGACGGAAGCTGGGGAAGACACCAAGGAAGAGGGTGTACATgtaagttttt ... ttatttgcagGATGAACTCTAGGAAGTTTGCAAAACGGATAAAGAGTGAGCGGAAGTTATA
EST: gi|214007293|gb|DB986229.1|DB986229
EST:     CTGAATCAAAGACGGAAGCTGGGGAAGACACCAAGGAAGAGGGTGTACAT                         GATGAACTCTAGGAAGTTTGCAAAACGGATAAAGAGTGAGCGGAAGTTATA
genomic: CTGAATCAAAGACGGAAGCTGGGGAAGACACCAAGGAAGAGGGTGTACATgtaagttttt ... ttatttgcagGATGAACTCTAGGAAGTTTGCAAAACGGATAAAGAGTGAGCGGAAGTTATA
EST: gi|208147176|gb|GD944899.1|GD944899
EST:     CTGAATCAAAGACGGAAGCTGGGGAAGACACCAAGGAAGAGGGTGTACAT                         GATGAACTCTAGGAAGTTTGCAAAACGGATAAAGAGTGAGCGGAAGTTATA
genomic: CTGAATCAAAGACGGAAGCTGGGGAAGACACCAAGGAAGAGGGTGTACATgtaagttttt ... ttatttgcagGATGAACTCTAGGAAGTTTGCAAAACGGATAAAGAGTGAGCGGAAGTTATA
EST: gi|209719567|gb|BW651019.1|BW651019
EST:     CTGAATCAAAGACGGAAGCTGGGGAAGACACCAAGGAAGAGGGTGTACAT                         GATGAACTCTAGGAAGTTTGCAAAACGGATAAAGAGTGAGCGGAAGTTATA
genomic: CTGAATCAAAGACGGAAGCTGGGGAAGACACCAAGGAAGAGGGTGTACATgtaagttttt ... ttatttgcagGATGAACTCTAGGAAGTTTGCAAAACGGATAAAGAGTGAGCGGAAGTTATA
EST: gi|213591169|gb|DB982911.1|DB982911
EST:     CTGAATCAAAGACGGAAGCTGGGGAAGACACCAAGGAAGAGGGTGTACAT                         GATGAACTCTAGGAAGTTTGCAAAACGGATAAAGAGTGAGCGGAAGTTATA
genomic: CTGAATCAAAGACGGAAGCTGGGGAAGACACCAAGGAAGAGGGTGTACATgtaagttttt ... ttatttgcagGATGAACTCTAGGAAGTTTGCAAAACGGATAAAGAGTGAGCGGAAGTTATA
EST: gi|7285731|gb|AW598218.1|AW598218
EST:     CTGAATCAAAGACGGAAGCTGGGGAAGACACCAAGGAAGAGGGTGTACAT                         GATGAACTCTAGGAAGTTTGCAAAACGGATAAAGAGTGAGCGGAAGTTATA
genomic: CTGAATCAAAGACGGAAGCTGGGGAAGACACCAAGGAAGAGGGTGTACATgtaagttttt ... ttatttgcagGATGAACTCTAGGAAGTTTGCAAAACGGATAAAGAGTGAGCGGAAGTTATA
EST: gi|208136751|gb|GD939697.1|GD939697
EST:     CTGAATCAAAGACGGAAGCTGGGGAAGACACCAAGGAAGAGGGTGTACAT                         GATGAACTCTAGGAAGTTTGCAAAACGGATAAAGAGTGAGCGGAAGTTATA
genomic: CTGAATCAAAGACGGAAGCTGGGGAAGACACCAAGGAAGAGGGTGTACATgtaagttttt ... ttatttgcagGATGAACTCTAGGAAGTTTGCAAAACGGATAAAGAGTGAGCGGAAGTTATA
EST: gi|6913405|gb|AW394935.1|AW394935
EST:     CTGAATCAAAGACGGAAGCTGGGGAAGACACCAAGGAAGAGGGTGTACAT                         GATGAACTCTAGGAAGTTTGCAAAACGGATAAAGAGTGAGCGGAAGTTATA
genomic: CTGAATCAAAGACGGAAGCTGGGGAAGACACCAAGGAAGAGGGTGTACATgtaagttttt ... ttatttgcagGATGAACTCTAGGAAGTTTGCAAAACGGATAAAGAGTGAGCGGAAGTTATA
EST: gi|208305484|gb|GE105383.1|GE105383
EST:     CTGAATCAAAGACGGAAGCTGGGGAAGACACCAAGGAAGAGGGTGTACAT                         GATGAACTCTAGGAAGTTTGACAAAACGGAATAAAG
genomic: CTGAATCAAAGACGGAAGCTGGGGAAGACACCAAGGAAGAGGGTGTACATgtaagttttt ... ttatttgcagGATGAACTCTAGGAAGTTTG-CAAAACGGA-TAAAG
EST: gi|208195920|gb|GD994439.1|GD994439
EST:     CTGAATCAAAGACGGAAGCTGGGGAAGACACCAAGGAAGAGGGTGTACAT                         GATGAACTCTAGGAAGTTTGCAAAACGGATAAAGAGTGAGCGGAAGTTATA
genomic: CTGAATCAAAGACGGAAGCTGGGGAAGACACCAAGGAAGAGGGTGTACATgtaagttttt ... ttatttgcagGATGAACTCTAGGAAGTTTGCAAAACGGATAAAGAGTGAGCGGAAGTTATA
EST: gi|254348789|gb|GR852468.1|GR852468
EST:     CTGAATCAAAGACGGAAGCTGGGGAAGACACCAAGGAAGAGGGTGTACAT                         GATGAACTCTAGGAAGTTTGCAAAACGGATAAAGAGTGAGCGGAAGTTATA
genomic: CTGAATCAAAGACGGAAGCTGGGGAAGACACCAAGGAAGAGGGTGTACATgtaagttttt ... ttatttgcagGATGAACTCTAGGAAGTTTGCAAAACGGATAAAGAGTGAGCGGAAGTTATA
EST: gi|254348440|gb|GR852119.1|GR852119
EST:     CTGAATCAAAGACGGAAGCTGGGGAAGACACCAAGGAAGAGGGTGTACAT                         GATGAACTCTAGGAAGTTTGCAAAACGGATAAAGAGTGAGCGGAAGTTATA
genomic: CTGAATCAAAGACGGAAGCTGGGGAAGACACCAAGGAAGAGGGTGTACATgtaagttttt ... ttatttgcagGATGAACTCTAGGAAGTTTGCAAAACGGATAAAGAGTGAGCGGAAGTTATA
EST: gi|208042253|gb|GD839531.1|GD839531
EST:     CTGAATCAAAGACGGAAGCTGGGGAAGACACCAAGGAAGAGGGTGTACAT                         GATGAACTCTAGGAAGTTTGCAAAACGGATAAAGAGTGAGCGGAAGTTATA
genomic: CTGAATCAAAGACGGAAGCTGGGGAAGACACCAAGGAAGAGGGTGTACATgtaagttttt ... ttatttgcagGATGAACTCTAGGAAGTTTGCAAAACGGATAAAGAGTGAGCGGAAGTTATA
EST: gi|193640916|gb|FK588947.1|FK588947
EST:     CTGAATCAAAGACGGAAGCTGGGGAAGACACCAAGGAAGAGGGTGTACAT                         GATGAACTCTAGGAAGTTTGCAAAACGGATAAAGAGTGAGCGGAAGTTATA
genomic: CTGAATCAAAGACGGAAGCTGGGGAAGACACCAAGGAAGAGGGTGTACATgtaagttttt ... ttatttgcagGATGAACTCTAGGAAGTTTGCAAAACGGATAAAGAGTGAGCGGAAGTTATA
EST: gi|15203979|gb|BI426756.1|BI426756
EST:     CTGAATCAAAGACGGAAGCTGGGGAAGACACCAAGGAAGAGGGTGTACAT                         GATGAACTCTAGGAAGTTTGCAAAACGGATAAAGAGTGAGCGGA
genomic: CTGAATCAAAGACGGAAGCTGGGGAAGACACCAAGGAAGAGGGTGTACATgtaagttttt ... ttatttgcagGATGAACTCTAGGAAGTTTGCAAAACGGATAAAGAGTGAGCGGA
EST: gi|208094493|gb|GD891628.1|GD891628
EST:     CTGAATCAAAGACGGAAGCTGGGGAAGACACCAAGGAAGAGGGTGTACAT                         GATGAACTCTAGGAAGTTTGCAAAACGGATAAAGAGTGAGCGGAAGTTATA
genomic: CTGAATCAAAGACGGAAGCTGGGGAAGACACCAAGGAAGAGGGTGTACATgtaagttttt ... ttatttgcagGATGAACTCTAGGAAGTTTGCAAAACGGATAAAGAGTGAGCGGAAGTTATA
EST: gi|193637475|gb|FK584470.1|FK584470
EST:     GGGGAAGACACCAAGGAAGAGGGTGTACAT                         GATGAACTCTAGGAAGTTTGCAAAACGGATAAAGAGTGAGCGGAAGTTATA
genomic: GGGGAAGACACCAAGGAAGAGGGTGTACATgtaagttttt ... ttatttgcagGATGAACTCTAGGAAGTTTGCAAAACGGATAAAGAGTGAGCGGAAGTTATA
EST: gi|193555675|gb|FK513222.1|FK513222
EST:     CTGAATCAAAGACGGAAGCTGGGGAAGACACCAAGGAAGAGGGTGTACAT                         GATGAACTCTAGGAAGTTTGCAAAACGGATAAAGAGTGAGCGGAAGTTATA
genomic: CTGAATCAAAGACGGAAGCTGGGGAAGACACCAAGGAAGAGGGTGTACATgtaagttttt ... ttatttgcagGATGAACTCTAGGAAGTTTGCAAAACGGATAAAGAGTGAGCGGAAGTTATA
EST: gi|213601764|gb|DB982489.1|DB982489
EST:     CTGAATCAAAGACGGAAGCTGGGGAAGACACCAAGGAAGAGGGTGTACAT                         GATGAACTCTAGGAAGTTTGCAAAACGGATAAAGAGTGAGCGGAAGTTATA
genomic: CTGAATCAAAGACGGAAGCTGGGGAAGACACCAAGGAAGAGGGTGTACATgtaagttttt ... ttatttgcagGATGAACTCTAGGAAGTTTGCAAAACGGATAAAGAGTGAGCGGAAGTTATA

Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
GCTGATGAGGAAGAGGAAGATGCTGATGAAGCTGGCAATGACTCCGATGCTGAATCAAAGACGGAAGCTGGGGAAGACACCAAGGAAGAGGGTGTACATgtaagtttttccatcccctcctcagtatctcattttaatcaagcttggcaacaatgtatttaataattcttcccgttttatttgcag

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AAGGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AAGAGG