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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AGGGTTCAGAAGGCAATTGATACTAAAGCATGCAATGCTCTTCTCCTCAAGgtactcttattccactcatgtaaatcttttagggaaaagttgttggagctatgttgatgtgcatatacaccataacttgacacaaaccttaattgaacag

Basic information

species Glycine max
transcript GLYMA19G37520.1
intron # 13
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|151393954|gb|EV263825.1|EV263825
EST:     GGGTTCAGAAGGCAATTGATACTAAAGCATGCAATGCTCTTCTCCTCAAG                         GTCAACCAAATTGGTTCTGTGACTGAGAGTATTGAAGCTGTCAGGATGTCC
genomic: GGGTTCAGAAGGCAATTGATACTAAAGCATGCAATGCTCTTCTCCTCAAGgtactcttat ... aattgaacagGTCAACCAAATTGGTTCTGTGACTGAGAGTATTGAAGCTGTCAGGATGTCC
EST: gi|15662135|gb|BI699506.1|BI699506
EST:     CAATGCTCTTCTCCTCAAG                         GTCAACCAAATTGGTTCTGTGACTGAGAGTATTGAAGCTGTCAGGATGTCC
genomic: CAATGCTCTTCTCCTCAAGgtactcttat ... aattgaacagGTCAACCAAATTGGTTCTGTGACTGAGAGTATTGAAGCTGTCAGGATGTCC
EST: gi|6566448|gb|AW234093.1|AW234093
EST:     GGGTTCAGAAGGCAATTGATACAAAAGCATGCAATGCTCTTCTCCTCAAG                         GTCAACCAAATTGGTTCTGTGACTGAGAGTATTGAAGCTGTCAGGATGTCC
genomic: GGGTTCAGAAGGCAATTGATACTAAAGCATGCAATGCTCTTCTCCTCAAGgtactcttat ... aattgaacagGTCAACCAAATTGGTTCTGTGACTGAGAGTATTGAAGCTGTCAGGATGTCC
EST: gi|209713143|gb|BW653852.1|BW653852
EST:     GGGTTCAGAAGGCAATTGATACAAAAGCATGCAATGCTCTTCTCCTCAAG                         GTCAACCAAATTGGTTCTGTGACTGAGAGTATTGAAGCTGTCAGGATGTCC
genomic: GGGTTCAGAAGGCAATTGATACTAAAGCATGCAATGCTCTTCTCCTCAAGgtactcttat ... aattgaacagGTCAACCAAATTGGTTCTGTGACTGAGAGTATTGAAGCTGTCAGGATGTCC
EST: gi|213592747|gb|DB981279.1|DB981279
EST:     GGTTCAGAAGGCAATTGATACAAAAGCATGCAATGC-CTTCATCCTCAAG                         GTCAACCAAATTGGTTCTGTGACTGAGAGTATTGAAGCTGTCAGGATGTC
genomic: GGTTCAGAAGGCAATTGATACTAAAGCATGCAATGCTCTTC-TCCTCAAGgtactcttat ... aattgaacagGTCAACCAAATTGGTTCTGTGACTGAGAGTATTGAAGCTGTCAGGATGTC
EST: gi|209728018|gb|BW666740.1|BW666740
EST:     GGGTTCAGAAGGCAATTGATACAAAAGCATGCAATGCTCTTCTCCTCAAG                         GTCAACCAAATTGGTTCTGTGACTGAGAGTATTGAAGCTGTCAGGATGTCC
genomic: GGGTTCAGAAGGCAATTGATACTAAAGCATGCAATGCTCTTCTCCTCAAGgtactcttat ... aattgaacagGTCAACCAAATTGGTTCTGTGACTGAGAGTATTGAAGCTGTCAGGATGTCC
EST: gi|254344482|gb|GR851179.1|GR851179
EST:     GGGTTCAGAAGGCAATTGATACTAAAGCATGCAATGCTCTTCTCCTCAAG                         GTCAACCAAATTGGGTTCTGTGACTGAGAGTATTGGAAGCTGTCAGGATGT
genomic: GGGTTCAGAAGGCAATTGATACTAAAGCATGCAATGCTCTTCTCCTCAAGgtactcttat ... aattgaacagGTCAACCAAATTGG-TTCTGTGACTGAGAGTATTG-AAGCTGTCAGGATGT
EST: gi|27425654|gb|CA937174.1|CA937174
EST:     GGGTTCAGAAGGCAATTGATACTAAAGCATGCAATGCTCTTCTCCTCAAG                         GTCAACCAAATTGGTTCTGTGACTGAGAGTATTGAAGCTGTCAGGATGTCC
genomic: GGGTTCAGAAGGCAATTGATACTAAAGCATGCAATGCTCTTCTCCTCAAGgtactcttat ... aattgaacagGTCAACCAAATTGGTTCTGTGACTGAGAGTATTGAAGCTGTCAGGATGTCC
EST: gi|21889620|gb|BQ742833.1|BQ742833
EST:     GGGTTCAGAAGGCAATTGATACTAAAGCATGCAATGCTCTTCTCCTCAAG                         GTCAACCAAATTGGTTCTGTGACTGAGAGTATTGAAGCTGTCAGGATGTCC
genomic: GGGTTCAGAAGGCAATTGATACTAAAGCATGCAATGCTCTTCTCCTCAAGgtactcttat ... aattgaacagGTCAACCAAATTGGTTCTGTGACTGAGAGTATTGAAGCTGTCAGGATGTCC
EST: gi|254320729|gb|GR827178.1|GR827178
EST:     GGGTTCAGAAGGCAATTGATACTAAAGCATGCAATGCTCTTCTCCTCAAG                         GTCAACCAAATTGGTTCTGTGACTGAGAGTATTGAAGCTGTCAGGATGTCC
genomic: GGGTTCAGAAGGCAATTGATACTAAAGCATGCAATGCTCTTCTCCTCAAGgtactcttat ... aattgaacagGTCAACCAAATTGGTTCTGTGACTGAGAGTATTGAAGCTGTCAGGATGTCC
EST: gi|7589135|gb|AW704915.1|AW704915
EST:     GGGGTCAGAAGGCAATTGATACTAAGGCATGCAATGCTCTTCTACTCAAG                         GTCAACCAAATTGGGTGTGTGACTGAGGGTATAGAAGCT
genomic: GGGTTCAGAAGGCAATTGATACTAAAGCATGCAATGCTCTTCTCCTCAAGgtactcttat ... aattgaacagGTCAACCAAATTGGTTCTGTGACTGAGAGTATTGAAGCT
EST: gi|209725451|gb|BW658304.1|BW658304
EST:     GGGTTCAGAAGGCAATTGATACAAAAGCATGCAATGCTCTTCTCCTCAAG                         GTCAACCAAATTGGTTCTGTGACTGAGAGTATTGAAGCTGTCAGGATGTCC
genomic: GGGTTCAGAAGGCAATTGATACTAAAGCATGCAATGCTCTTCTCCTCAAGgtactcttat ... aattgaacagGTCAACCAAATTGGTTCTGTGACTGAGAGTATTGAAGCTGTCAGGATGTCC
EST: gi|254315248|gb|GR830241.1|GR830241
EST:     GGGTTCAGAAGGCAATTGATACTAAAGCATGCAATGCTCTTCTCCTCAAG                         GTCAACCAAATTGGTTCTGTGACTGAGAGTATTGAAGCTGTCAGGATGTCC
genomic: GGGTTCAGAAGGCAATTGATACTAAAGCATGCAATGCTCTTCTCCTCAAGgtactcttat ... aattgaacagGTCAACCAAATTGGTTCTGTGACTGAGAGTATTGAAGCTGTCAGGATGTCC
EST: gi|51335443|gb|CO979309.1|CO979309
EST:     GGGTTCAGAAGGCAATTGATACTAAAGCATGCAATGCTCTTCTCCTCAAG                         GTCAACCAAATTGGTTCTGTGACTGAGAGTATTGAAGCTGTCAGGATGTCC
genomic: GGGTTCAGAAGGCAATTGATACTAAAGCATGCAATGCTCTTCTCCTCAAGgtactcttat ... aattgaacagGTCAACCAAATTGGTTCTGTGACTGAGAGTATTGAAGCTGTCAGGATGTCC
EST: gi|19935365|gb|BQ080395.1|BQ080395
EST:     GGGTTCAGAAGGCAATTGATATTAAAGCATGCAATGCTCTTCTCCTCAAG                         GTCAACCAAATTGGTTCTGTGACTGAGAGTATTGAAGCTGTCAGGATGTCC
genomic: GGGTTCAGAAGGCAATTGATACTAAAGCATGCAATGCTCTTCTCCTCAAGgtactcttat ... aattgaacagGTCAACCAAATTGGTTCTGTGACTGAGAGTATTGAAGCTGTCAGGATGTCC
EST: gi|254320730|gb|GR827179.1|GR827179
EST:     GGGTTCAGAAGGCAATTGATACTAAAGCATGCAATGCTCTTCTCCTCAAG                         GTCAACCAAATTGGTTCTGTGACTGAGAGTATTGAAGCTGTCAGGATGTCC
genomic: GGGTTCAGAAGGCAATTGATACTAAAGCATGCAATGCTCTTCTCCTCAAGgtactcttat ... aattgaacagGTCAACCAAATTGGTTCTGTGACTGAGAGTATTGAAGCTGTCAGGATGTCC
EST: gi|18690784|gb|BM519632.1|BM519632
EST:     GGGTTCAGAAGGCAATTGATACTAAAGCATGCAATGCTCTTCTCCTCAAG                         GTCAACCAAATTGGTTCTGTGACTGAGAGTATTGAAGCTGTCAGGATGTCC
genomic: GGGTTCAGAAGGCAATTGATACTAAAGCATGCAATGCTCTTCTCCTCAAGgtactcttat ... aattgaacagGTCAACCAAATTGGTTCTGTGACTGAGAGTATTGAAGCTGTCAGGATGTCC
EST: gi|209716148|gb|BW662333.1|BW662333
EST:     GGGTTCAGAAGGCAATTGATACAAAAGCATGCAATGCTCTTCTCCTCAAG                         GTCAACCAAATTGGTTCTGTGACTGAGAGTATTGAAGCTGTCAGGATGTCC
genomic: GGGTTCAGAAGGCAATTGATACTAAAGCATGCAATGCTCTTCTCCTCAAGgtactcttat ... aattgaacagGTCAACCAAATTGGTTCTGTGACTGAGAGTATTGAAGCTGTCAGGATGTCC
EST: gi|16346691|gb|BI972286.1|BI972286
EST:     GGGTTCAGAAGGCAATTGATACTAAAGCATGCAATGCTCTTCTCCTCAAG                         GTCAACCAAATTGGTTCTGTGACTGAGAGTATTGAAGCTGTCAGGATGTCC
genomic: GGGTTCAGAAGGCAATTGATACTAAAGCATGCAATGCTCTTCTCCTCAAGgtactcttat ... aattgaacagGTCAACCAAATTGGTTCTGTGACTGAGAGTATTGAAGCTGTCAGGATGTCC
EST: gi|17021632|gb|BM092666.1|BM092666
EST:     GGGTTCAGAAGGCAATTGATACTAAAGCATGCAATGCTCTTCTCCTCAAG                         GTCAACCAAATTGGTTCTGTGACTGAGAGTATTGAAGCTGTCAGGATGTCC
genomic: GGGTTCAGAAGGCAATTGATACTAAAGCATGCAATGCTCTTCTCCTCAAGgtactcttat ... aattgaacagGTCAACCAAATTGGTTCTGTGACTGAGAGTATTGAAGCTGTCAGGATGTCC
EST: gi|16348013|gb|BI973608.1|BI973608
EST:     GGGTTCAGAAGGCAATTGATACTAAAGCATGCAATGCTCTTCTCCTCAAG                         GTCAACCAAATTGGTTCTGTGACTGAGAGTATTGAAGCTGTCAGGATGTCC
genomic: GGGTTCAGAAGGCAATTGATACTAAAGCATGCAATGCTCTTCTCCTCAAGgtactcttat ... aattgaacagGTCAACCAAATTGGTTCTGTGACTGAGAGTATTGAAGCTGTCAGGATGTCC
EST: gi|13481453|gb|BG510796.1|BG510796
EST:     GGGTTCAGAAGGCAATTGATACTAAAGCATGCAATGCTCTTCTCCTCAAG                         GTCAACCAAATTGGTTCTGTGACTGAGAGTATTGAAGCTGTCAGGATGTCC
genomic: GGGTTCAGAAGGCAATTGATACTAAAGCATGCAATGCTCTTCTCCTCAAGgtactcttat ... aattgaacagGTCAACCAAATTGGTTCTGTGACTGAGAGTATTGAAGCTGTCAGGATGTCC
EST: gi|21888828|gb|BQ742041.1|BQ742041
EST:     GGGTTCAGAAGGCAATTGATACTAAAGCATGCAATGCTCTTCTCCTCAAG                         GTCAACCAAATTGGTTCTGTGACTGAGAGTATTGAAGCTGTCAGGATGTCC
genomic: GGGTTCAGAAGGCAATTGATACTAAAGCATGCAATGCTCTTCTCCTCAAGgtactcttat ... aattgaacagGTCAACCAAATTGGTTCTGTGACTGAGAGTATTGAAGCTGTCAGGATGTCC
EST: gi|58024814|gb|CX711555.1|CX711555
EST:     GGGTTCAGAAGGCAATTGATACTAAAGCATGCAATGCTCTTCTCCTCAAG                         GTCAACCAAATTGGTTCTGTGACTGAGAGTATTGAAGCTGTCAGGATGTCC
genomic: GGGTTCAGAAGGCAATTGATACTAAAGCATGCAATGCTCTTCTCCTCAAGgtactcttat ... aattgaacagGTCAACCAAATTGGTTCTGTGACTGAGAGTATTGAAGCTGTCAGGATGTCC
EST: gi|120491912|gb|EH220079.1|EH220079
EST:     GGGTTCAGAAGGCAATTGATACTAAAGCATGCAATGCTCTTCTCCTCAAG                         GTCAACCAAATTGGTTCTGTGACTGAGAGTATTGAAGCTGTCAGGATGTCC
genomic: GGGTTCAGAAGGCAATTGATACTAAAGCATGCAATGCTCTTCTCCTCAAGgtactcttat ... aattgaacagGTCAACCAAATTGGTTCTGTGACTGAGAGTATTGAAGCTGTCAGGATGTCC
EST: gi|23063689|gb|BU578600.1|BU578600
EST:     GGGTTCAGAAGGCAATTGATACTAAAGCATGCAATGCTCTTCTCCTCAAG                         GTCAACCAAATTGGTTCTGTGACTGAGAGTATTGAAGCTGTCAGGATGTCC
genomic: GGGTTCAGAAGGCAATTGATACTAAAGCATGCAATGCTCTTCTCCTCAAGgtactcttat ... aattgaacagGTCAACCAAATTGGTTCTGTGACTGAGAGTATTGAAGCTGTCAGGATGTCC
EST: gi|209708401|gb|BW665376.1|BW665376
EST:     GGGTTCAGAAGGCAATTGATACAAAAGCATGCAATGCTCTTCTCCTCAAG                         GTCAACCAAATTGGTTCTGTGACTGAGAGTATTGAAGCTGTCAGGATGTCC
genomic: GGGTTCAGAAGGCAATTGATACTAAAGCATGCAATGCTCTTCTCCTCAAGgtactcttat ... aattgaacagGTCAACCAAATTGGTTCTGTGACTGAGAGTATTGAAGCTGTCAGGATGTCC
EST: gi|14516239|gb|BI094911.1|BI094911
EST:     GGGTTCAGAAGGCAATTGATACTAAAGCATGCAATGCTCTTCTCCTCAAG                         GTCAACCAAATTGGTTCTGTGACTGAGAGTATTGAAGCTGTCAGGATGTCC
genomic: GGGTTCAGAAGGCAATTGATACTAAAGCATGCAATGCTCTTCTCCTCAAGgtactcttat ... aattgaacagGTCAACCAAATTGGTTCTGTGACTGAGAGTATTGAAGCTGTCAGGATGTCC
EST: gi|14990742|gb|BI316415.1|BI316415
EST:     GGGTTCAGAAGGCAATTGATACTAAAGCATGCAATGCTCTTCTCCTCAAG                         GTCAACCAAATTGGTTCTGTGACTGAGAGTATTGAAGCTGTCAGGATGTCC
genomic: GGGTTCAGAAGGCAATTGATACTAAAGCATGCAATGCTCTTCTCCTCAAGgtactcttat ... aattgaacagGTCAACCAAATTGGTTCTGTGACTGAGAGTATTGAAGCTGTCAGGATGTCC
EST: gi|254325332|gb|GR838213.1|GR838213
EST:     GGGTTCAGAAGGCAATTGATACTAAAGCATGCAATGCTCTTCTCCTCAAG                         GTCAACCAAATTGGTTCTGTGACTGAGAGTATTGAAGCTGTCAGGATGTCC
genomic: GGGTTCAGAAGGCAATTGATACTAAAGCATGCAATGCTCTTCTCCTCAAGgtactcttat ... aattgaacagGTCAACCAAATTGGTTCTGTGACTGAGAGTATTGAAGCTGTCAGGATGTCC
EST: gi|6846455|gb|AW348745.1|AW348745
EST:     GGGTTCAGAAGGCAATTGATACTAAAGCATGCAATGCTCTTCTCCTCAAG                         GTCAACCAAATTGGTTCTGTGACTGAGAGTATTGAAGCTGTCAGGATGTCC
genomic: GGGTTCAGAAGGCAATTGATACTAAAGCATGCAATGCTCTTCTCCTCAAGgtactcttat ... aattgaacagGTCAACCAAATTGGTTCTGTGACTGAGAGTATTGAAGCTGTCAGGATGTCC
EST: gi|14516240|gb|BI094912.1|BI094912
EST:     GGGTTCAGAAGGCAATTGATACTAAAGCATGCAATGCTCTTCTCCTCAAG                         GTCAACCAAATTGGTTCTGTGACTGAGAGTATTGAAGCTGTCAGGATGTCC
genomic: GGGTTCAGAAGGCAATTGATACTAAAGCATGCAATGCTCTTCTCCTCAAGgtactcttat ... aattgaacagGTCAACCAAATTGGTTCTGTGACTGAGAGTATTGAAGCTGTCAGGATGTCC
EST: gi|22522608|gb|BU081419.1|BU081419
EST:     GGGTTCAGAAGGCAATTGATACTAAAGCATGCAATGCTCTTCTCCTCAAG                         GTCAACCAAATTGGTTCTGTGACTGAGAGTATTGAAGCTGTCAGGATGTCC
genomic: GGGTTCAGAAGGCAATTGATACTAAAGCATGCAATGCTCTTCTCCTCAAGgtactcttat ... aattgaacagGTCAACCAAATTGGTTCTGTGACTGAGAGTATTGAAGCTGTCAGGATGTCC
EST: gi|208317560|gb|GE114885.1|GE114885
EST:     GGGTTCAGAAGGCAATTGATACTAAAGCATGCAATGCTCTTCTCCTCAAG                         GTCAACCAAATTGGTTCTGTGACTGAGAGTATTGAAGCTGTCAGGATGTCC
genomic: GGGTTCAGAAGGCAATTGATACTAAAGCATGCAATGCTCTTCTCCTCAAGgtactcttat ... aattgaacagGTCAACCAAATTGGTTCTGTGACTGAGAGTATTGAAGCTGTCAGGATGTCC
EST: gi|193403433|gb|FK367727.1|FK367727
EST:     GGGTTCAGAAGGCAATTGATACTAAAGCATGCAATGCTCTTCTCCTCAAG                         GTCAACCAAATTGGTTCTGTGACTGAGAGTAT
genomic: GGGTTCAGAAGGCAATTGATACTAAAGCATGCAATGCTCTTCTCCTCAAGgtactcttat ... aattgaacagGTCAACCAAATTGGTTCTGTGACTGAGAGTAT
EST: gi|7639418|gb|AW733741.1|AW733741
EST:     GGTTCAGAAAGGAAATTGATACTAAAGCATGCAATGCTCTTCTCCTCAAG                         GTCAACCAAATTGGTTCTGTGACTGAGAGTATTGAAGCTGTCAGGATGTCC
genomic: GGTTCAGAA-GGCAATTGATACTAAAGCATGCAATGCTCTTCTCCTCAAGgtactcttat ... aattgaacagGTCAACCAAATTGGTTCTGTGACTGAGAGTATTGAAGCTGTCAGGATGTCC
EST: gi|18039384|gb|BM307678.1|BM307678
EST:     GGGTTCAGAAGGCAATTGATACTAAAGCATGCAATGCTCTTCTCCTCAAG                         GTCAACCAAATTGGTTCTGTGACTGAGAGTATTGAAGCTGTCAGGATGTCC
genomic: GGGTTCAGAAGGCAATTGATACTAAAGCATGCAATGCTCTTCTCCTCAAGgtactcttat ... aattgaacagGTCAACCAAATTGGTTCTGTGACTGAGAGTATTGAAGCTGTCAGGATGTCC
EST: gi|21602235|gb|BQ612566.1|BQ612566
EST:     GGGTTCAGAAGGCAATTGATACTAAAGCATGCAATGCTCTTCTCCTCAAG                         GTCAACCAAATTGGTTCTGTGACTGAGAGTATTGAAGCTGTCAGGATGTCC
genomic: GGGTTCAGAAGGCAATTGATACTAAAGCATGCAATGCTCTTCTCCTCAAGgtactcttat ... aattgaacagGTCAACCAAATTGGTTCTGTGACTGAGAGTATTGAAGCTGTCAGGATGTCC
EST: gi|6848147|gb|AW350437.1|AW350437
EST:     GGGTTCAGAAGGCAATTGATANNAAAGCATGCAATGCTCTTCTNNNCAAG                         GTCAACCAAATTGGTTCTGTGACTGAGAGTATTGAAGCTGTCAGGATGTCC
genomic: GGGTTCAGAAGGCAATTGATACTAAAGCATGCAATGCTCTTCTCCTCAAGgtactcttat ... aattgaacagGTCAACCAAATTGGTTCTGTGACTGAGAGTATTGAAGCTGTCAGGATGTCC
EST: gi|26059076|gb|CA801990.1|CA801990
EST:     ATTGATACAAAAGCATGCAATGCTCTTCTCCTCAAG                         GTCAACCAAATTGGTTCTGTGACTGAGAGTATTGAAGCTGTCAGGATGTCC
genomic: ATTGATACTAAAGCATGCAATGCTCTTCTCCTCAAGgtactcttat ... aattgaacagGTCAACCAAATTGGTTCTGTGACTGAGAGTATTGAAGCTGTCAGGATGTCC
EST: gi|8401561|gb|BE057125.1|BE057125
EST:     AGCATGCAATGCTCTTCTCCTCAAG                         GTCAACCAAATTGGTTCTGTGACTGAGAGTATTGAAGCTGTCAGGATGTCC
genomic: AGCATGCAATGCTCTTCTCCTCAAGgtactcttat ... aattgaacagGTCAACCAAATTGGTTCTGTGACTGAGAGTATTGAAGCTGTCAGGATGTCC
EST: gi|58021795|gb|CX708536.1|CX708536
EST:     GGGTTCAGAAGGCAATTGATACTAAAGCATGCAATGCTCTTCTCCTCAAG                         GTCAACCAAATTGGTTCTGTGACTGAGAGTATTGAAGCTGTCAGGATGTCC
genomic: GGGTTCAGAAGGCAATTGATACTAAAGCATGCAATGCTCTTCTCCTCAAGgtactcttat ... aattgaacagGTCAACCAAATTGGTTCTGTGACTGAGAGTATTGAAGCTGTCAGGATGTCC
EST: gi|13252038|gb|BG362941.1|BG362941
EST:     GGGTTCAGAAGGCAATTGATACTAAAGCATGCAATGCTCTTCTCCTCAAG                         GTCAACCAAATTGGTTCTGTGACTGAGAGTATTGAAGCTGTCAGGATGTCC
genomic: GGGTTCAGAAGGCAATTGATACTAAAGCATGCAATGCTCTTCTCCTCAAGgtactcttat ... aattgaacagGTCAACCAAATTGGTTCTGTGACTGAGAGTATTGAAGCTGTCAGGATGTCC
EST: gi|213593444|gb|DB977131.1|DB977131
EST:     GAAGGCAATTGATACAAAAGCATGC-ATCCT-TTGGTCCTCAAG                         GTCAACCAAATTGGTTCTGTGACTGAGAGTATTGAAGCTGTCAGGATGTC
genomic: GAAGGCAATTGATACTAAAGCATGCAATGCTCTT-CTCCTCAAGgtactcttat ... aattgaacagGTCAACCAAATTGGTTCTGTGACTGAGAGTATTGAAGCTGTCAGGATGTC
EST: gi|298169068|gb|HO020428.1|HO020428
EST:     GGGTTCAGAAGGCAATTGATACTAAAGCATGCAATGCTCTTCTCCTCAAG                         GTCAACCAAATTGGTTCTGTGACTGAGAGTATTGAAGCTGTCAGGATGTCC
genomic: GGGTTCAGAAGGCAATTGATACTAAAGCATGCAATGCTCTTCTCCTCAAGgtactcttat ... aattgaacagGTCAACCAAATTGGTTCTGTGACTGAGAGTATTGAAGCTGTCAGGATGTCC
EST: gi|24137025|gb|BU927535.1|BU927535
EST:     GGGTTCAGAAGGCAATTGATACTAAAGCATGCAATGCTCTTCTCCTCAAG                         GTCAACCAAATTGGTTCTGTGACTGAGAGTATTGAAGCTGTCAGGATGTCC
genomic: GGGTTCAGAAGGCAATTGATACTAAAGCATGCAATGCTCTTCTCCTCAAGgtactcttat ... aattgaacagGTCAACCAAATTGGTTCTGTGACTGAGAGTATTGAAGCTGTCAGGATGTCC

Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
AGGGTTCAGAAGGCAATTGATACTAAAGCATGCAATGCTCTTCTCCTCAAGgtactcttattccactcatgtaaatcttttagggaaaagttgttggagctatgttgatgtgcatatacaccataacttgacacaaaccttaattgaacag

- - - - - - - - - - - - - - - - - - - - - CTCCTC