1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
TTCTGGGCCTAACCTTGTTCCTTGCGATATCAATACCACAATATTTTGTCATGAACACCGCACCAGATGGTCATGGTCCAGTTAGAACAGATGGTGGATGggtaagtgactcttcaaatatcttatttctacattccctgtgattaatttgaaatctaatctttcgtgaacccatagttaaggttataaatgtgtgtaac...
species | Glycine max |
transcript | GLYMA17G36440.1 |
intron # | 13 |
splice site | 5' |
intron type | U2 |
EST: ATGAACACCGCACCAGATGGTCATGGTCCAGTTAGAACAGATGGTGGATG GTTTAATGACATTTTGAACACCATATTCTCTTCTGCCCCAACTGTGGCTATEST: gi|42722951|gb|CK768850.1|CK768850
genomic: ATGAACACCGCACCAGATGGTCATGGTCCAGTTAGAACAGATGGTGGATGggtaagtgac ... tgtcacaacaGTTTAATGACATTTTGAACACCATATTCTCTTCTGCCCCAACTGTGGCTAT
EST: ATGAACACCGCACCAGATGGTCATGGTCCAGTTAGAACAGATGGTGGATG GTTTAATGACATTTTGAACACCATATTCTCTTCTGCCCCAACTGTGGCTATEST: gi|22932582|gb|BU549721.1|BU549721
genomic: ATGAACACCGCACCAGATGGTCATGGTCCAGTTAGAACAGATGGTGGATGggtaagtgac ... tgtcacaacaGTTTAATGACATTTTGAACACCATATTCTCTTCTGCCCCAACTGTGGCTAT
EST: ATGAACACCGCACCAGATGGTCATGGTCCAGTTAGAACAGATGGTGGATG GTTTAATGACATTTTGAACACCATATTCTCTTCTGCCCCAACTGTGGCTATEST: gi|13563436|gb|BG551665.1|BG551665
genomic: ATGAACACCGCACCAGATGGTCATGGTCCAGTTAGAACAGATGGTGGATGggtaagtgac ... tgtcacaacaGTTTAATGACATTTTGAACACCATATTCTCTTCTGCCCCAACTGTGGCTAT
EST: ATGAACACCGCACCAGATGGTCATGGTCCAGTTAGAACAGATGGTGGATG GTTTAATGACATTTTGAACACCATATTCTCTTCTGCCCCAACTGTGGCTAT
genomic: ATGAACACCGCACCAGATGGTCATGGTCCAGTTAGAACAGATGGTGGATGggtaagtgac ... tgtcacaacaGTTTAATGACATTTTGAACACCATATTCTCTTCTGCCCCAACTGTGGCTAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TTCTGGGCCTAACCTTGTTCCTTGCGATATCAATACCACAATATTTTGTCATGAACACCGCACCAGATGGTCATGGTCCAGTTAGAACAGATGGTGGATGggtaagtgactcttcaaatatcttatttctacattccctgtgattaatttgaaatctaatctttcgtgaacccatagttaaggttataaatgtgtgtaac
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGTGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGTGGA