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AGAAGAACTCGAGAAAATCGCTGTGGTGAATCTCCTGCAGAATAGATCCATCATCTCTCTCATTGGAAATGTTCAGAGATCATCACTAATATTGGAGAAGgttctgtattatgctccctttatttaaattagttcatatcctaactttcacttatgtataaagatttactgaatttattacaatattactatctgggcct...
species | Glycine max |
transcript | GLYMA16G26300.1 |
intron # | 13 |
splice site | 5' |
intron type | U2 |
EST: TCATCTCTCTCATTGGAAATGTTCAGAGATCATCACTAATATTGGAGAAG GCTTTCCGTGTTCTTCGAACCCTTGGCATCACGGTGCAAATGATCTCTCAGEST: gi|58021976|gb|CX708717.1|CX708717
genomic: TCATCTCTCTCATTGGAAATGTTCAGAGATCATCACTAATATTGGAGAAGgttctgtatt ... tctattgcagGCTTTCCGTGTTCTTCGAACCCTTGGCATCACGGTGCAAATGATCTCTCAG
EST: TCATCTCTCTCATTGGAAATGTTCAGAGATCATCACTAATATTGGAGAAG GCTTTCCGTGTTCTTCGAACCCTTGGCATCACGGTGCAAATGATCTCTCAGEST: gi|192312160|gb|FK003895.1|FK003895
genomic: TCATCTCTCTCATTGGAAATGTTCAGAGATCATCACTAATATTGGAGAAGgttctgtatt ... tctattgcagGCTTTCCGTGTTCTTCGAACCCTTGGCATCACGGTGCAAATGATCTCTCAG
EST: ACTAATATTGGAGAAG GCTTTCCGTGTTCTTCGAACCCTTGGCATCACGGTGCAAATGATCTCTCAGEST: gi|193418204|gb|FK384696.1|FK384696
genomic: ACTAATATTGGAGAAGgttctgtatt ... tctattgcagGCTTTCCGTGTTCTTCGAACCCTTGGCATCACGGTGCAAATGATCTCTCAG
EST: TCATCTCTCTCATTGGAAATGTTCGGAGATCATCACTAATATTGGAGAAG GCTTTCCGTGTTCTTCGAACCCTTGGCATCACGGTGCAAATGATCTEST: gi|31469542|gb|CD411570.1|CD411570
genomic: TCATCTCTCTCATTGGAAATGTTCAGAGATCATCACTAATATTGGAGAAGgttctgtatt ... tctattgcagGCTTTCCGTGTTCTTCGAACCCTTGGCATCACGGTGCAAATGATCT
EST: ATTGGAAATGTTCAGAGATCATCACTAATATTGGAGAAG GCTTTCCGTGTTCTTCGAACCCTTGGCATCACGGTGCAAATGATCTCTCAGEST: gi|207702225|gb|GD682980.1|GD682980
genomic: ATTGGAAATGTTCAGAGATCATCACTAATATTGGAGAAGgttctgtatt ... tctattgcagGCTTTCCGTGTTCTTCGAACCCTTGGCATCACGGTGCAAATGATCTCTCAG
EST: TCATCTCTCTCATTGGAAATGTTCAGAGATCATCACTAATATTGGAGAAG GCTTTCCGTGTTCTTCGAACCCTTGGCGTCACTGTGCAAATGATCTCCCAG
genomic: TCATCTCTCTCATTGGAAATGTTCAGAGATCATCACTAATATTGGAGAAGgttctgtatt ... tctattgcagGCTTTCCGTGTTCTTCGAACCCTTGGCATCACGGTGCAAATGATCTCTCAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AGAAGAACTCGAGAAAATCGCTGTGGTGAATCTCCTGCAGAATAGATCCATCATCTCTCTCATTGGAAATGTTCAGAGATCATCACTAATATTGGAGAAGgttctgtattatgctccctttatttaaattagttcatatcctaactttcacttatgtataaagatttactgaatttattacaatattactatctgggcct
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGATC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGATCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ctccctt