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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGTGGTGAGGTGGCAAATCAACAAGTGCATTTGCCTTTGATTTTGCCTAAAGTTCCTGGCCGGTTCTACTTTTATTTTGGAAAACCATTGGAAACGAAAGgtatgccctatgcatatttacagcttggcatttttatttttattttgctgagttgtctgtacagcttggaatattgtccatgaagtatatatggtgttaaaatttaaaaatgatttttccttaaatttaatgagatattgtttgacag

Basic information

species Glycine max
transcript GLYMA16G05580.1
intron # 13
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|51345114|gb|CO985847.1|CO985847
EST:     AGTTCCTGGCCGGTTCTACTTTTATTTTGGAAAACCATTGGAAACGAAAG                         GAAGGGAACAAGAACTGAGAGACAAGCAGAAATCTCAAGAGTTATATTTAC
genomic: AGTTCCTGGCCGGTTCTACTTTTATTTTGGAAAACCATTGGAAACGAAAGgtatgcccta ... tgtttgacagGAAGGGAACAAGAACTGAGAGACAAGCAGAAATCTCAAGAGTTATATTTAC
EST: gi|254346773|gb|GR856495.1|GR856495
EST:     AGTTCCTGGCCGGTTCTACTTTTATTTTGGAAAACCATTGGAAACGAAAG                         GAAGGGAACAAGAACTGAGAGACAAGCAGAAATCTCAAGAGTTATATTTAC
genomic: AGTTCCTGGCCGGTTCTACTTTTATTTTGGAAAACCATTGGAAACGAAAGgtatgcccta ... tgtttgacagGAAGGGAACAAGAACTGAGAGACAAGCAGAAATCTCAAGAGTTATATTTAC