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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTGAATTTACAATGACTGAACTTGCTGAGACAGTTAAAGAGgtcagttttaagcatttttttctttattagtaccactcacttctcctattttggtttacatgtgcatgttttccttttaagttaagctgtgaatagtaaa...

Basic information

species Glycine max
transcript GLYMA15G04500.2
intron # 13
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|10231271|gb|BE800168.1|BE800168
EST:     GTGAATTTACAATGACTGAACTTGCTGAGACAGTTAAAGAG                         CTTATTAATCCAGGTGTGGAGATCAAGATGGTGGAGAACACTCCTGATGAC
genomic: GTGAATTTACAATGACTGAACTTGCTGAGACAGTTAAAGAGgtcagtttta ... ggtttttcagCTTATTAATCCAGGTGTGGAGATCAAGATGGTGGAGAACACTCCTGATGAC
EST: gi|213604211|gb|DB974253.1|DB974253
EST:     GTGAATTTACAATGACTGAACTTGCTGAGACAGTTAAAGAG                         CTGATTAATCCAGGTGTGGAGATCAAGATGGTGGAGAACACTCCTGATGGG
genomic: GTGAATTTACAATGACTGAACTTGCTGAGACAGTTAAAGAGgtcagtttta ... ggtttttcagCTTATTAATCCAGGTGTGGAGATCAAGATGGTGGAGAACACTCCTGATGAC
EST: gi|21676124|gb|BQ628475.1|BQ628475
EST:     GTGAATTTACAATGACTGAACTTGCTGAGACAGTTAAAGAG                         CTTATTAATCCAGGTGTGGAGATCAAGATGGTGGAGAACACTCCTGATGAC
genomic: GTGAATTTACAATGACTGAACTTGCTGAGACAGTTAAAGAGgtcagtttta ... ggtttttcagCTTATTAATCCAGGTGTGGAGATCAAGATGGTGGAGAACACTCCTGATGAC
EST: gi|22928257|gb|BU545396.1|BU545396
EST:     GTGAATTTACAATGACTGAACTTGCTGAGACAGTTAAAGAG                         CTTATTAATCCAGGTGTGGAGATCAAGATGGTGGAGAACACTCCTGATGAC
genomic: GTGAATTTACAATGACTGAACTTGCTGAGACAGTTAAAGAGgtcagtttta ... ggtttttcagCTTATTAATCCAGGTGTGGAGATCAAGATGGTGGAGAACACTCCTGATGAC