1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' |
GAAAACTGGGCAGAAGGATATCTTTTACATAACTGGAACCAGCAAAGAACAACTGGAAAACTCTCCCTTCCTTGAGCGGCTTAAGAAGAAAAATTTTGAGgtacaatttaaattgtttgatttttattacaagtatatttgctctattatttgttcttttaaaaacatttgtctttctattctgctgagagatgatgatttaatgtcttctaaatgtattttcttttgaatttgctacag
species | Glycine max |
transcript | GLYMA14G40320.3 |
intron # | 13 |
splice site | 5' |
intron type | U2 |
EST: AACTGGAAAACTCTCCCTTCCTTGAGCGGCTTAAGAAGAAAAATTTTGAG GTTATTTTCTTCACGGATCCAGTTGATGAGTACTTGATGCAATACCTGATGEST: gi|15661681|gb|BI699052.1|BI699052
genomic: AACTGGAAAACTCTCCCTTCCTTGAGCGGCTTAAGAAGAAAAATTTTGAGgtacaattta ... tttgctacagGTTATTTTCTTCACGGATCCAGTTGATGAGTACTTGATGCAATACCTGATG
EST: AACTGGAAAACTCTCCCTTCCTTGAGCGGCTTAAGAAGAAAAATTTTGAG GTTATTTTCTTCACGGATCCAEST: gi|192307635|gb|FG999674.1|FG999674
genomic: AACTGGAAAACTCTCCCTTCCTTGAGCGGCTTAAGAAGAAAAATTTTGAGgtacaattta ... tttgctacagGTTATTTTCTTCACGGATCCA
EST: AACTGGAAAACTCTCCCTTCCTTGAGCGGCTTAAGAAGAAAAATTTTGAG GTTATTTTCTTCACGGATCCAGTTGATGAGTACTTGATGCAATACCTGATGEST: gi|151398470|gb|EV268341.1|EV268341
genomic: AACTGGAAAACTCTCCCTTCCTTGAGCGGCTTAAGAAGAAAAATTTTGAGgtacaattta ... tttgctacagGTTATTTTCTTCACGGATCCAGTTGATGAGTACTTGATGCAATACCTGATG
EST: GGAAAACTCTCCCTTCCTTGAGCGGCTTAAGAAGAAAAATTTTGAG GTTATTTTCTTCACGGATCCAGTTGATGAGTACTTGATGCAATACCTGATGEST: gi|193550593|gb|FK508890.1|FK508890
genomic: GGAAAACTCTCCCTTCCTTGAGCGGCTTAAGAAGAAAAATTTTGAGgtacaattta ... tttgctacagGTTATTTTCTTCACGGATCCAGTTGATGAGTACTTGATGCAATACCTGATG
EST: AACTGGAAAACTCTCCCTTCCTTGAGCGGCTTAAGAAGAAAAATTTTGAG GTTATTTTCTTCACGGATCCAGTTGEST: gi|7925492|gb|AW831518.1|AW831518
genomic: AACTGGAAAACTCTCCCTTCCTTGAGCGGCTTAAGAAGAAAAATTTTGAGgtacaattta ... tttgctacagGTTATTTTCTTCACGGATCCAGTTG
EST: AACTGGAAAACTCTCCCTTCCTTGAGCGGCTTAAGAAGAAAAATTTTGAG GTTATTTTCTTCACGGATCCAGTTGATGAGTACTTGATGCAATACCTGATGEST: gi|192313364|gb|FK005136.1|FK005136
genomic: AACTGGAAAACTCTCCCTTCCTTGAGCGGCTTAAGAAGAAAAATTTTGAGgtacaattta ... tttgctacagGTTATTTTCTTCACGGATCCAGTTGATGAGTACTTGATGCAATACCTGATG
EST: AACTGGAAAACTCTCCCTTCCTTGAGCGGCTTAAGAAGAAAAATTTTGAG GTTATTTTCTTCACGGATCCAGTTGATGAGTACTTGATGCAATACCTGATGEST: gi|37995336|gb|CF806925.1|CF806925
genomic: AACTGGAAAACTCTCCCTTCCTTGAGCGGCTTAAGAAGAAAAATTTTGAGgtacaattta ... tttgctacagGTTATTTTCTTCACGGATCCAGTTGATGAGTACTTGATGCAATACCTGATG
EST: AACTGGAAAACTCTCCCTTCCTTGAGCGGCTTAAGAAGAAAAATTTTGAG GTTATTTTCTTCACGGATCCAGTTGATGAGTACTTGATGCAATACCTGATGEST: gi|192313365|gb|FK005137.1|FK005137
genomic: AACTGGAAAACTCTCCCTTCCTTGAGCGGCTTAAGAAGAAAAATTTTGAGgtacaattta ... tttgctacagGTTATTTTCTTCACGGATCCAGTTGATGAGTACTTGATGCAATACCTGATG
EST: AACTGGAAAACTCTCCCTTCCTTGAGCGGCTTAAGAAGAAAAATTTTGAG GTTATTTTCTTCACGGATCCAGTTGATGAGTACTTGATGCAATACCTGATGEST: gi|208175635|gb|GD973418.1|GD973418
genomic: AACTGGAAAACTCTCCCTTCCTTGAGCGGCTTAAGAAGAAAAATTTTGAGgtacaattta ... tttgctacagGTTATTTTCTTCACGGATCCAGTTGATGAGTACTTGATGCAATACCTGATG
EST: AACTGGAAAACTCTCCATTCCTTGAGCGGCTTAAGAAGAAAAATTTTGAG GTTATTTTCTTCACGGATCCAGTTGATGAATACTTGATGCAATACCTGATG
genomic: AACTGGAAAACTCTCCCTTCCTTGAGCGGCTTAAGAAGAAAAATTTTGAGgtacaattta ... tttgctacagGTTATTTTCTTCACGGATCCAGTTGATGAGTACTTGATGCAATACCTGATG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAAAACTGGGCAGAAGGATATCTTTTACATAACTGGAACCAGCAAAGAACAACTGGAAAACTCTCCCTTCCTTGAGCGGCTTAAGAAGAAAAATTTTGAGgtacaatttaaattgtttgatttttattacaagtatatttgctctattatttgttcttttaaaaacatttgtctttctattctgctgagagatgatgatttaatgtcttctaaatgtattttcttttgaatttgctacag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAA