1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
AGAGAGGTGAAAGCATTGCTGCAGTCTGCGCTGGAAGTATCACTTTCTATTGTGCGGGCTAATCCTACTGTTTTGGAGGGTCTTGGTGCTCATTTAGAAGgtaactgtacgtgctgtattttatatttggtgattggtggaatgtttgtgttgattgccaaaaaactaatagtgaatacttacaatttttttaacttaat...
species | Glycine max |
transcript | GLYMA14G37090.1 |
intron # | 13 |
splice site | 5' |
intron type | U2 |
EST: GTTTTGGAGGGTCTTGGTGCTCATTTAGAAG AAAAAGAGAAAGTAGAGGGTGAAGAGCTACAGAAGTGGTTAAGATTGGTAGEST: gi|14011883|gb|BG726805.1|BG726805
genomic: GTTTTGGAGGGTCTTGGTGCTCATTTAGAAGgtaactgtac ... tattcttcagAAAAAGAGAAAGTAGAGGGTGAAGAGCTACAGAAGTGGTTAAGATTGGTAG
EST: TGTGCGGGCTAATCCTACTGTTTTGGAGGGTCTTGGTGCTCATTTAGAAG AAAAAGAGAAAGTAGAGGGTGAAGAGCTACAGAAGTGGTTAAGATTGGTAGEST: gi|120495143|gb|EH223310.1|EH223310
genomic: TGTGCGGGCTAATCCTACTGTTTTGGAGGGTCTTGGTGCTCATTTAGAAGgtaactgtac ... tattcttcagAAAAAGAGAAAGTAGAGGGTGAAGAGCTACAGAAGTGGTTAAGATTGGTAG
EST: TGTGCGGGCTAATCCTACTGTTTTGGAGGGTCTTGGTGCTCATTTAGAAG AAAAAGAGAAAGTAGAGGGTGAAGAGCTACAGAAGTGGTTAAGATTGGTAGEST: gi|209702223|gb|BW652356.1|BW652356
genomic: TGTGCGGGCTAATCCTACTGTTTTGGAGGGTCTTGGTGCTCATTTAGAAGgtaactgtac ... tattcttcagAAAAAGAGAAAGTAGAGGGTGAAGAGCTACAGAAGTGGTTAAGATTGGTAG
EST: TGTGCGGGCTAATCCTACTGTTTTGGAGGGTCTTGGTGCTCATTTAGAAG AAAAAGAGAAAGTAGAGGGTGAAGAGCTACAGAAGTGGTTAAGATTGGTAGEST: gi|20498713|gb|BQ273643.1|BQ273643
genomic: TGTGCGGGCTAATCCTACTGTTTTGGAGGGTCTTGGTGCTCATTTAGAAGgtaactgtac ... tattcttcagAAAAAGAGAAAGTAGAGGGTGAAGAGCTACAGAAGTGGTTAAGATTGGTAG
EST: TGTGCGGGCTAATCCTACTGTTTTGGAGGGTCTTGGTGCTCATTTAGAAG AAAA-GAGAAAG
genomic: TGTGCGGGCTAATCCTACTGTTTTGGAGGGTCTTGGTGCTCATTTAGAAGgtaactgtac ... tattcttcagAAAAAGAGAAAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AGAGAGGTGAAAGCATTGCTGCAGTCTGCGCTGGAAGTATCACTTTCTATTGTGCGGGCTAATCCTACTGTTTTGGAGGGTCTTGGTGCTCATTTAGAAGgtaactgtacgtgctgtattttatatttggtgattggtggaatgtttgtgttgattgccaaaaaactaatagtgaatacttacaatttttttaacttaat
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ttggtgg