1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' |
TCTAGGGTTGAGAAGGTACTGGAAGCAGTTCATATAGCTGCCAATAAAAATACCGTTCCAGGGGATGTGTCTGCTATGGTTCCTGGAGGCATTCGAATGGgtacagtctgttgctcatcttttttttatgcttttattagtggatctataattacatgttaataaagattattttcttgtgattcag
species | Glycine max |
transcript | GLYMA14G36280.1 |
intron # | 13 |
splice site | 5' |
intron type | U2 |
EST: TACCGTTCCAGGGGATGTGTCTGCTATGGTTCCTGGAGGCATTCGAATGG GAACCCCTGCTCTCACATCTATGGGATTTGTTGAGGAAGATTTTGAAAAAGEST: gi|7796703|gb|AW782097.1|AW782097
genomic: TACCGTTCCAGGGGATGTGTCTGCTATGGTTCCTGGAGGCATTCGAATGGgtacagtctg ... tgtgattcagGAACCCCTGCTCTCACATCTAGGGGATTTGTTGAGGAAGATTTTGAAAAAG
EST: TACCGTTCCANGGGATGTGTCTGCTATGGTTCCTGGAGGCATTCGAATGG GAACCCCTGCTCTCACATCTAGGGGATCTGTTGAGGAAGATNNTGAAAAAGEST: gi|151398597|gb|EV268468.1|EV268468
genomic: TACCGTTCCAGGGGATGTGTCTGCTATGGTTCCTGGAGGCATTCGAATGGgtacagtctg ... tgtgattcagGAACCCCTGCTCTCACATCTAGGGGATTTGTTGAGGAAGATTTTGAAAAAG
EST: TACCGTTCCAGGGGATGTGTCTGCTATGGTTCCTGGAGGCATTCGAATGG GAACCCCTGCTCTCACATCTAGGGGATTTGTTGAGGAAGATTTTGAAAAAGEST: gi|151409184|gb|EV278992.1|EV278992
genomic: TACCGTTCCAGGGGATGTGTCTGCTATGGTTCCTGGAGGCATTCGAATGGgtacagtctg ... tgtgattcagGAACCCCTGCTCTCACATCTAGGGGATTTGTTGAGGAAGATTTTGAAAAAG
EST: TACCGTTCCAGGGGATGTGTCTGCTATGGTTCCTGGAGGCATTCGAATGG GAACCCCTGCTCTCACATCTAGGGGATTTGTTGAGGAAGATTTTGAAAAAGEST: gi|22931163|gb|BU548302.1|BU548302
genomic: TACCGTTCCAGGGGATGTGTCTGCTATGGTTCCTGGAGGCATTCGAATGGgtacagtctg ... tgtgattcagGAACCCCTGCTCTCACATCTAGGGGATTTGTTGAGGAAGATTTTGAAAAAG
EST: TACCGTTCCAGGGGATGTGTCTGCTATGGTTCNNNGAGGCATTCGAATGG GAACCCCTGCTCTCACATCTAGGGGATTTGTTGAGGAAGATTTTGAAAAAGEST: gi|209724641|gb|BW651426.1|BW651426
genomic: TACCGTTCCAGGGGATGTGTCTGCTATGGTTCCTGGAGGCATTCGAATGGgtacagtctg ... tgtgattcagGAACCCCTGCTCTCACATCTAGGGGATTTGTTGAGGAAGATTTTGAAAAAG
EST: TACCGTTCCAGGGGATGTGTCTGCTATGGTTCCTGGAGGCATTCGAATGG GAACCCCTGCTCTCACATCTAGGGGATTTGTTGAGGAAGATTTTGAAAAAGEST: gi|192315079|gb|FK010449.1|FK010449
genomic: TACCGTTCCAGGGGATGTGTCTGCTATGGTTCCTGGAGGCATTCGAATGGgtacagtctg ... tgtgattcagGAACCCCTGCTCTCACATCTAGGGGATTTGTTGAGGAAGATTTTGAAAAAG
EST: TACCGTTCCAGGGGATGTGCCTGCTATGGTTCCTGGAGGCATTCGAATGG GAACCCCTGCTCTCACATCTAGGGGATTTGTTGAGGAAGATTTTGAAAAAGEST: gi|13240115|gb|BG359424.1|BG359424
genomic: TACCGTTCCAGGGGATGTGTCTGCTATGGTTCCTGGAGGCATTCGAATGGgtacagtctg ... tgtgattcagGAACCCCTGCTCTCACATCTAGGGGATTTGTTGAGGAAGATTTTGAAAAAG
EST: TACCGTTCCAAGGGATGTGTCTGCTATGGTTCCTGGAGGCATTCGAATGG GAACCCCTGCTCTCACATCTAGGGGATTTGTTGAGGAAGATTTTEST: gi|192298247|gb|FG992067.1|FG992067
genomic: TACCGTTCCAGGGGATGTGTCTGCTATGGTTCCTGGAGGCATTCGAATGGgtacagtctg ... tgtgattcagGAACCCCTGCTCTCACATCTAGGGGATTTGTTGAGGAAGATTTT
EST: TACCGTTCCAGGGGATGTGTCTGCTATGGTTCCTGGAGGCATTCGAATGG GAACCCCTGCTCTCACATCTAGGGGATTTGTTGAGGAAGATTTTGAAAAAG
genomic: TACCGTTCCAGGGGATGTGTCTGCTATGGTTCCTGGAGGCATTCGAATGGgtacagtctg ... tgtgattcagGAACCCCTGCTCTCACATCTAGGGGATTTGTTGAGGAAGATTTTGAAAAAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TCTAGGGTTGAGAAGGTACTGGAAGCAGTTCATATAGCTGCCAATAAAAATACCGTTCCAGGGGATGTGTCTGCTATGGTTCCTGGAGGCATTCGAATGGgtacagtctgttgctcatcttttttttatgcttttattagtggatctataattacatgttaataaagattattttcttgtgattcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGG