1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
TCTGGGCCTAACCTTGTTCCTTGCGATATCAATACCACAATATTTTGTCATGAACACTGCACCGGATGGTCATGGTCCAGTTAGAACAGGTGGTGGATGGgtaagtgactcttcgaatatcttatttctacattccctgtgattaatttggcatataatctttcgtgaacccataattaaggttataaatgtttgtaact...
species | Glycine max |
transcript | GLYMA14G08690.1 |
intron # | 13 |
splice site | 5' |
intron type | U2 |
EST: TGAACACTGCACCGGATGGTCATGGTCCAGTTAGAACAGGTGGTGGATGG TTTAATGACATTTTGAACACCATATTCTCTTCTGCCCCAACTGTGGCTATAEST: gi|58019531|gb|CX706273.1|CX706273
genomic: TGAACACTGCACCGGATGGTCATGGTCCAGTTAGAACAGGTGGTGGATGGgtaagtgact ... gtcacaacagTTTAATGACATTTTGAACACCATATTCTCTTCTGCCCCAACTGTGGCTATA
EST: TGAACACTGCACCGGATGGTCATGGTCCAGTTAGAACAGGTGGTGGATGG TTTAATGACATTTTGAACACCATATTCTCTTCTGCCCCAACTGTGGCTATAEST: gi|8283233|gb|BE020794.1|BE020794
genomic: TGAACACTGCACCGGATGGTCATGGTCCAGTTAGAACAGGTGGTGGATGGgtaagtgact ... gtcacaacagTTTAATGACATTTTGAACACCATATTCTCTTCTGCCCCAACTGTGGCTATA
EST: TGAACACTGCACCGGATGGTCATGGTCCAGTTAGAACAGGTGGTGGATGG TTTAATGACATTTTGAACACCATATTCTCTTCTGCCCCAACTGTGGCTATAEST: gi|21678141|gb|BQ630492.1|BQ630492
genomic: TGAACACTGCACCGGATGGTCATGGTCCAGTTAGAACAGGTGGTGGATGGgtaagtgact ... gtcacaacagTTTAATGACATTTTGAACACCATATTCTCTTCTGCCCCAACTGTGGCTATA
EST: TGAACACTGCACCGGATGGTCATGGTCCANNNNNNNCAGGTGGTGGATGG TTTAATGACATTTTGAACACCATATTCTCTTCTGCCCCAACTGTGGCTATAEST: gi|17964666|gb|BM271398.1|BM271398
genomic: TGAACACTGCACCGGATGGTCATGGTCCAGTTAGAACAGGTGGTGGATGGgtaagtgact ... gtcacaacagTTTAATGACATTTTGAACACCATATTCTCTTCTGCCCCAACTGTGGCTATA
EST: TGAACACTGCACCGGATGGTCATGGTCCAGTTAGAACAGGTGGTGGATGG TTTAATGACATTTTGAACACCATATTCTCTTCTGCCCCAACTGTGGCTATAEST: gi|18041036|gb|BM309330.1|BM309330
genomic: TGAACACTGCACCGGATGGTCATGGTCCAGTTAGAACAGGTGGTGGATGGgtaagtgact ... gtcacaacagTTTAATGACATTTTGAACACCATATTCTCTTCTGCCCCAACTGTGGCTATA
EST: TGAACACTGCACCGGATGGTCATGGTCCAGTTAGAACAGGTGGTGGATGG TTTAATGACATTTTGAACACCATATTCTCTTCTGCCCCAACTGTGGCTATAEST: gi|9564705|gb|BE474214.1|BE474214
genomic: TGAACACTGCACCGGATGGTCATGGTCCAGTTAGAACAGGTGGTGGATGGgtaagtgact ... gtcacaacagTTTAATGACATTTTGAACACCATATTCTCTTCTGCCCCAACTGTGGCTATA
EST: TGAACACTGCACCGGATGGTCATGGTCCAGTTAGAACAGGTGGTGGATGG TTTAATGACATTTTGAACACCATATTCTCTTCTGCCCCAACTGTGGCTATAEST: gi|10256108|gb|BE823874.1|BE823874
genomic: TGAACACTGCACCGGATGGTCATGGTCCAGTTAGAACAGGTGGTGGATGGgtaagtgact ... gtcacaacagTTTAATGACATTTTGAACACCATATTCTCTTCTGCCCCAACTGTGGCTATA
EST: TGAACACTGCACCGGATGGTCATGGTCCAGTTAGAACAGGTGGTGGATGG TTTAATGACATTTTGAACACCATATTCTCTTCTGCCCCAACTGTGGCTATAEST: gi|16345404|gb|BI970999.1|BI970999
genomic: TGAACACTGCACCGGATGGTCATGGTCCAGTTAGAACAGGTGGTGGATGGgtaagtgact ... gtcacaacagTTTAATGACATTTTGAACACCATATTCTCTTCTGCCCCAACTGTGGCTATA
EST: TGAACACTGCACCGGATGGTCATGGTCCAGTTAGAACAGGTGGTGGATGG TTTAATGACATTTTGAACACCATATTCTCTTCTGCCCCAACTGTGGCTATAEST: gi|22931108|gb|BU548247.1|BU548247
genomic: TGAACACTGCACCGGATGGTCATGGTCCAGTTAGAACAGGTGGTGGATGGgtaagtgact ... gtcacaacagTTTAATGACATTTTGAACACCATATTCTCTTCTGCCCCAACTGTGGCTATA
EST: TGAACACTGCACCGGATGGTCATGGTCCAGTTAGAACAGGTGGTGGATGG TTTAATGACATTTTGAACACCATATTCTCTTCTGCCCCAACTGTGGCTATA
genomic: TGAACACTGCACCGGATGGTCATGGTCCAGTTAGAACAGGTGGTGGATGGgtaagtgact ... gtcacaacagTTTAATGACATTTTGAACACCATATTCTCTTCTGCCCCAACTGTGGCTATA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TCTGGGCCTAACCTTGTTCCTTGCGATATCAATACCACAATATTTTGTCATGAACACTGCACCGGATGGTCATGGTCCAGTTAGAACAGGTGGTGGATGGgtaagtgactcttcgaatatcttatttctacattccctgtgattaatttggcatataatctttcgtgaacccataattaaggttataaatgtttgtaact
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGTGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGTGGA