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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTGAATTTACAATGACTGAACTTGCTGAGACCGTGAAAGAGgtcagttttaagcatctttaaatataattgagctatttttcttaaggtggattgcatgttcagtgtaccaaaccaatttcatccatatttatgttgaaagtgtgaatgaaaatcttttcaagtttttgtttaatgttttgtgggtggtttgcag

Basic information

species Glycine max
transcript GLYMA13G40960.1
intron # 13
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|7284861|gb|AW597348.1|AW597348
EST:     GTGAATTTACAATGACTGAACTTGCTGAGACCGTGAAAGAG                         CTTATTAATCCAGGTGTGGAGATCAAGATGGTGGAGAACACTCCTGATGAT
genomic: GTGAATTTACAATGACTGAACTTGCTGAGACCGTGAAAGAGgtcagtttta ... tggtttgcagCTTATTAATCCAGGTGTGGAGATCAAGATGGTGGAGAACACTCCTGATGAT
EST: gi|6847748|gb|AW350038.1|AW350038
EST:     GAAACCCAGGTGAATTTACAATGACTGAACTTGCTGAGACCGTGAAAGAG                         CTTATTAATCCAGGTGTGGAGATCAAGATGGTGGAGAACACTNNTGATGAT
genomic: GAAACCCAGGTGAATTTACAATGACTGAACTTGCTGAGACCGTGAAAGAGgtcagtttta ... tggtttgcagCTTATTAATCCAGGTGTGGAGATCAAGATGGTGGAGAACACTCCTGATGAT