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CTCCAGAGTTTGAGTCAGGAATTTACACATACCAGAGTGATGTTTACAGCTTTGGAGTAGTTATGTTAGAACTTTTGACAGGCCGTCAGTCCTATGACAGgtgagagccaacaactgaagtacttcagcatctatttttttatgagtaaattacactaactacccctgaaatttaatgaaattacacaaacactcctgct...
species | Glycine max |
transcript | GLYMA12G32880.1 |
intron # | 13 |
splice site | 5' |
intron type | U2 |
EST: TTTGGAGTAGATATGTTAGAACTTTTGACAGGCCGTCAGTCCTATGACAG GACACGCCCTCGAGGGGAGCAGTTTCTGGTGAGGTGGGCTATTCCTCAGCTEST: gi|37994537|gb|CF806259.1|CF806259
genomic: TTTGGAGTAGTTATGTTAGAACTTTTGACAGGCCGTCAGTCCTATGACAGgtgagagcca ... tcttggacagGACACGCCCTCGAGGGGAGCAGTTTCTGGTGAGGTGGGCTATTCCTCAGCT
EST: TTTGGAGTAGTTATGTTAGAACTTTTGACAGGCCGTCAGTCCTATGACAG GACACGCCCTCGAGGGGAGCAGTTTCTGGTGAGGTGGGCTATTCCTCAGCTEST: gi|208032163|gb|GD832217.1|GD832217
genomic: TTTGGAGTAGTTATGTTAGAACTTTTGACAGGCCGTCAGTCCTATGACAGgtgagagcca ... tcttggacagGACACGCCCTCGAGGGGAGCAGTTTCTGGTGAGGTGGGCTATTCCTCAGCT
EST: TTTGGAGTAGTTATGTTAGAACTTTTGACAGGCCGTCAGTCCTATGACAG GACACGCCCTCGAGGGGAGCAGTTTCTGGTGAGGTGGGCTATTCCTCAGCT
genomic: TTTGGAGTAGTTATGTTAGAACTTTTGACAGGCCGTCAGTCCTATGACAGgtgagagcca ... tcttggacagGACACGCCCTCGAGGGGAGCAGTTTCTGGTGAGGTGGGCTATTCCTCAGCT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTCCAGAGTTTGAGTCAGGAATTTACACATACCAGAGTGATGTTTACAGCTTTGGAGTAGTTATGTTAGAACTTTTGACAGGCCGTCAGTCCTATGACAGgtgagagccaacaactgaagtacttcagcatctatttttttatgagtaaattacactaactacccctgaaatttaatgaaattacacaaacactcctgct
- - - - - - - - - - - - - - - - - - - - - - - - - TTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ctacccc