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ATTAGAAGACCATACTGATGAGGTAAATCTACATAGAGATGTGCTTGATGGGATGTTCACTTTCTATGATTCAACCAGGGCAAAGCTGAACATATATCAGgtatttgaagttatttgctttgtaccttgttctgtatacaaaggttagccattattagtggctgaatcaacttagtggatcattgatggagtcttgctta...
species | Glycine max |
transcript | GLYMA12G09710.1 |
intron # | 13 |
splice site | 5' |
intron type | U2 |
EST: GGATGTTCACTTTCTATGATTCAACCAGGGCAAAGCTGAACATATATCAG GTTGCCAGTGTCACATTTGACTTGCTGTTGCTTCTAGTGCTGGGATCGTATEST: gi|17518642|gb|BM187684.1|BM187684
genomic: GGATGTTCACTTTCTATGATTCAACCAGGGCAAAGCTGAACATATATCAGgtatttgaag ... ggttttacagGTTGCCAGTGTCACATTTGACTTGCTGTTGCTTCTAGTGCTGGGATCGTAT
EST: GGATGTTCACTTTCTATGATTCAACCAGGGCAAAGCTGAACATATATCAG GTTGCCAGTGTCACATTTGACTTGCTGTTGCTTCTAGTGCTGGGATCGTAT
genomic: GGATGTTCACTTTCTATGATTCAACCAGGGCAAAGCTGAACATATATCAGgtatttgaag ... ggttttacagGTTGCCAGTGTCACATTTGACTTGCTGTTGCTTCTAGTGCTGGGATCGTAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATTAGAAGACCATACTGATGAGGTAAATCTACATAGAGATGTGCTTGATGGGATGTTCACTTTCTATGATTCAACCAGGGCAAAGCTGAACATATATCAGgtatttgaagttatttgctttgtaccttgttctgtatacaaaggttagccattattagtggctgaatcaacttagtggatcattgatggagtcttgctta
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTGA