1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
AATAAGAGTTCCCAACATGGAGCCGCTGGTTAAAACAAACACATATGAGAGAGGATCTTATCACTGTTTCGATCCAAGCATATTTGAAACCGTCCGCAAGgttagtttttgtgaatatactctgtcgatgatgttagtgaactctgcctcctattccccaattaatattctttttttagcctctaatgtagaacctccttgcag
species | Glycine max |
transcript | GLYMA11G15480.2 |
intron # | 13 |
splice site | 5' |
intron type | U2 |
EST: GAGGATCTTATCACTGTTTCGATCCAAGCATATTTGAAACCGTCCGCAAG GATAATTTTGTTCTACATTATGAAATGTTGGAAAAGAGACCACATCTGCCTEST: gi|24135902|gb|BU926412.1|BU926412
genomic: GAGGATCTTATCACTGTTTCGATCCAAGCATATTTGAAACCGTCCGCAAGgttagttttt ... ctccttgcagGATAATTTTGTTCTACATTATGAAATGTTGGAAAAGAGACCACATCTGCCT
EST: GAGGATCTTATCACTGTTTCGATCCAAGCATATTTGAAACCGTCCGCAAG GATAATTTTGTTCTACATTATGAAATGTTGGAAAAGAGACCACATCTGCCTEST: gi|26048693|gb|CA785146.1|CA785146
genomic: GAGGATCTTATCACTGTTTCGATCCAAGCATATTTGAAACCGTCCGCAAGgttagttttt ... ctccttgcagGATAATTTTGTTCTACATTATGAAATGTTGGAAAAGAGACCACATCTGCCT
EST: GAGGATCTTATCACTGTTTCGATCCAAGCATATTTGAAACCGTCCGCAAG GATAATTTTGTTCTACATTATGAAATGTTGGAAAAGAGACCACATCTGCCTEST: gi|51338157|gb|CO982023.1|CO982023
genomic: GAGGATCTTATCACTGTTTCGATCCAAGCATATTTGAAACCGTCCGCAAGgttagttttt ... ctccttgcagGATAATTTTGTTCTACATTATGAAATGTTGGAAAAGAGACCACATCTGCCT
EST: GAGGATCTTATCACTGTTTCGATCCAAGCATATTTGAAACCGTCCGCAAG GATAATTTTGTTCTACATTATGAAATGTTGGAAAAGAGACCACATCTGCCT
genomic: GAGGATCTTATCACTGTTTCGATCCAAGCATATTTGAAACCGTCCGCAAGgttagttttt ... ctccttgcagGATAATTTTGTTCTACATTATGAAATGTTGGAAAAGAGACCACATCTGCCT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AATAAGAGTTCCCAACATGGAGCCGCTGGTTAAAACAAACACATATGAGAGAGGATCTTATCACTGTTTCGATCCAAGCATATTTGAAACCGTCCGCAAGgttagtttttgtgaatatactctgtcgatgatgttagtgaactctgcctcctattccccaattaatattctttttttagcctctaatgtagaacctccttgcag
- - - - - - - - - - - - - - - - - - - - - - - - - GAGGAT