1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
TCTACTTCATAAACATCTGGGTGATTTTCTTTCCACTGGCTGCATTAACCCAAAACAAGGATCACTTGCAAGTGAGCAGCTGAGAAACTTATATTCACAGgtttgtcctaaacgattccaagtcaatagcatcttctggtgtttatattttagtccattaatatgaaggctaatgattttatgtgtggttag
species | Glycine max |
transcript | GLYMA11G03800.1 |
intron # | 13 |
splice site | 5' |
intron type | U2 |
EST: CAAAACAAGGATCACTTGCAAGTGAGCAGCTGAGAA-CTTATATTCACAG GTCCGTCCTAATGCAATTGCGCTTGTTGATGCATTTAACTACACTGATCACEST: gi|254319492|gb|GR830679.1|GR830679
genomic: CAAAACAAGGATCACTTGCAAGTGAGCAGCTGAGAAACTTATATTCACAGgtttgtccta ... gtgtggttagGTCCGTCCTAATGCAATTGCGCTTGTTGATGCATTTAACTACACTGATCAC
EST: CAAAACAAGGATCACTTGCAAGTGAGCAGCTGAGAAACTTATATTCACAG GTCCGTCCTAATGCAATTGCGCTTGTTGATGCATTTAACTACACTGATCACEST: gi|7235111|gb|AW570370.1|AW570370
genomic: CAAAACAAGGATCACTTGCAAGTGAGCAGCTGAGAAACTTATATTCACAGgtttgtccta ... gtgtggttagGTCCGTCCTAATGCAATTGCGCTTGTTGATGCATTTAACTACACTGATCAC
EST: CAAAACAAGGATCACTTGCAAGTGAGCAGCTGAGAAACTTATATTCACAG GTCCGTCCTAATGCAATTGCGCTTGTTGATGCATTTAACTACACTGATCACEST: gi|31455923|gb|CD397951.1|CD397951
genomic: CAAAACAAGGATCACTTGCAAGTGAGCAGCTGAGAAACTTATATTCACAGgtttgtccta ... gtgtggttagGTCCGTCCTAATGCAATTGCGCTTGTTGATGCATTTAACTACACTGATCAC
EST: CCAAACCAGGATCACTTGCAAGTGAGCAGCTGAGAAACTTATATTCACAG GTCCGTCCTAATGCAATTGCGCTTGTTGATGCATTTAACTACCCTGATCACEST: gi|193684474|gb|FK624340.1|FK624340
genomic: CAAAACAAGGATCACTTGCAAGTGAGCAGCTGAGAAACTTATATTCACAGgtttgtccta ... gtgtggttagGTCCGTCCTAATGCAATTGCGCTTGTTGATGCATTTAACTACACTGATCAC
EST: CAAAACAAGGATCACTTGCAAGTGAGCAGCTGAGAAACTTATATTCACAG GTCCGTCCTAATGCAATTGCGCTTGTTGATGCATTTAACTACACTGATCACEST: gi|193337573|gb|FK304591.1|FK304591
genomic: CAAAACAAGGATCACTTGCAAGTGAGCAGCTGAGAAACTTATATTCACAGgtttgtccta ... gtgtggttagGTCCGTCCTAATGCAATTGCGCTTGTTGATGCATTTAACTACACTGATCAC
EST: ACAAGGATCACTTGCCAGTGAGCAGCTGAGAAACTTGTATTCACAG GTTCGTCCTAATGCAATTGCGCTTGTTGATGCATTTAACTACACTGATCAC
genomic: ACAAGGATCACTTGCAAGTGAGCAGCTGAGAAACTTATATTCACAGgtttgtccta ... gtgtggttagGTCCGTCCTAATGCAATTGCGCTTGTTGATGCATTTAACTACACTGATCAC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TCTACTTCATAAACATCTGGGTGATTTTCTTTCCACTGGCTGCATTAACCCAAAACAAGGATCACTTGCAAGTGAGCAGCTGAGAAACTTATATTCACAGgtttgtcctaaacgattccaagtcaatagcatcttctggtgtttatattttagtccattaatatgaaggctaatgattttatgtgtggttag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGCAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTGA