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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TCAACTGAATTGCACATTTATACTGACTTCTTGAGGCTTGTACTAGAAATAATAAATGCAATCCTGACTTATGCACTACCTCGGAATCCCGAGgtaaatgatcttgattgactgagaagatttatcatgcctatttttatctagtttgctgtaatagaaatttacattacaaccttttgcatctatcttactgatttcttgtgtgactggggcag

Basic information

species Glycine max
transcript GLYMA10G38920.1
intron # 13
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|151393515|gb|EV263390.1|EV263390
EST:     TAGAAATAATAAATGCAATCCTGACTTATGCACTACCTCGGAATCCCGAG                         GTAGTGTATGCAATAATGCACAGGCAGGAAGTCTTTCAGCCATTCAAGAAT
genomic: TAGAAATAATAAATGCAATCCTGACTTATGCACTACCTCGGAATCCCGAGgtaaatgatc ... actggggcagGTAGTGTATGCAATAATGCACAGGCAGGAAGTCTTTCAGCCATTCAAGAAT
EST: gi|254313688|gb|GR831317.1|GR831317
EST:     GCACTACCTCGGAATCCCGAG                         GTAGTGTATGCAATAATGCACAGGCAGGAAGTCTTTCAGCCATTCAAGAAT
genomic: GCACTACCTCGGAATCCCGAGgtaaatgatc ... actggggcagGTAGTGTATGCAATAATGCACAGGCAGGAAGTCTTTCAGCCATTCAAGAAT
EST: gi|9898564|gb|BE607532.1|BE607532
EST:     TAGAAATAATAAATGCAATCCTGACTTATGCACTACCTCGGAATCCCGAG                         GTAGTGTATGCAATAATGCACAGGCAGGAAGTCTTTCAGCCATTCAAGAAT
genomic: TAGAAATAATAAATGCAATCCTGACTTATGCACTACCTCGGAATCCCGAGgtaaatgatc ... actggggcagGTAGTGTATGCAATAATGCACAGGCAGGAAGTCTTTCAGCCATTCAAGAAT