Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   		7  
 5'  3'   		8  
 5'  3'   		9  
 5'  3'   		10  
 5'  3'   		11  
 5'  3'   		12  
 5'  3'   		13  
 5'  3'   		14  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTTGAAAACCCACTTCGAAACTAATCCAAAAGACCTAGgtaatgtaataggttgatattattgttaaaataccattgtcatttattttatttaaaattttatgtttgaagttaaatttaaaggattgaaattgtaattgaacag

Basic information

species Glycine max
transcript GLYMA10G29360.1
intron # 13
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|15662639|gb|BI700010.1|BI700010
EST:     GTTGAAAACCCACTTCGAAACTAATCCAAAAGACCTAG                         ATCTACTGAAGCATGACAAAATTTTGAGCAAGAATGCCCCACCTCCTCACC
genomic: GTTGAAAACCCACTTCGAAACTAATCCAAAAGACCTAGgtaatgtaat ... aattgaacagATCTACTGAAGCATGACAAAATTTTGAGCAAGAATGCCCCACCTCCTCACC
EST: gi|58022646|gb|CX709387.1|CX709387
EST:     GTTGAAAACCCACTTCGAAACTAATCCAAAAGACCTAG                         ATCTACTGAAGCATGACAAAATTTTGAGCAAGAATGCCCCACCTCCTCACC
genomic: GTTGAAAACCCACTTCGAAACTAATCCAAAAGACCTAGgtaatgtaat ... aattgaacagATCTACTGAAGCATGACAAAATTTTGAGCAAGAATGCCCCACCTCCTCACC
EST: gi|16343693|gb|BI969288.1|BI969288
EST:     GTTGAAAACCCACTTCGAAACTAATCCAAAAGACCTAG                         ATCTACTGAAGCATGACAAAATTTTGAGCAAGAATGCCCCACCTCCTCACC
genomic: GTTGAAAACCCACTTCGAAACTAATCCAAAAGACCTAGgtaatgtaat ... aattgaacagATCTACTGAAGCATGACAAAATTTTGAGCAAGAATGCCCCACCTCCTCACC
EST: gi|58019626|gb|CX706368.1|CX706368
EST:     GTTGAAAACCCACTTCGAAACTAATCCAAAAGACCTAG                         ATCTACTGAAGCATGACAAAATTTTGAGCAAGAATGCCCCACCTCCTCACC
genomic: GTTGAAAACCCACTTCGAAACTAATCCAAAAGACCTAGgtaatgtaat ... aattgaacagATCTACTGAAGCATGACAAAATTTTGAGCAAGAATGCCCCACCTCCTCACC