1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
GTCTCCTTATCACATACGTGGCTTTGAACTTAATGGATGGACATGGTCAACCAGCTTTGCTTTATATAGTCCCATTTACACTTGgttagtaaaataattagacaaaactcaatttaagttgagtaataaaacactgattattgtgcaaaaagaaatatttggacctattccattgtctgttgaa...
species | Glycine max |
transcript | GLYMA09G39500.1 |
intron # | 13 |
splice site | 5' |
intron type | U2 |
EST: GGATGGACATGGTCAACCAGCTTTGCTTTATATAGTCCCATTTACACTTG GAACCTTTCTGTCATTGGGAAAGAAGAGAGGTGAACTCAAGGTTTTATGGAEST: gi|9258837|gb|BE346984.1|BE346984
genomic: GGATGGACATGGTCAACCAGCTTTGCTTTATATAGTCCCATTTACACTTGgttagtaaaa ... gtatttgcagGAACCTTTCTGTCATTGGGAAAGAAGAGAGGTGAACTCAAGGTTTTATGGA
EST: GGATGGACATGGTCAACCAGCTTTGCTTTATATAGTCCCATTTACACTTG GAACCTTTCTGTCATTGGGAAAGAAGAGAGGTGAACTCAAGGTTTTATGGAEST: gi|22524144|gb|BU082955.1|BU082955
genomic: GGATGGACATGGTCAACCAGCTTTGCTTTATATAGTCCCATTTACACTTGgttagtaaaa ... gtatttgcagGAACCTTTCTGTCATTGGGAAAGAAGAGAGGTGAACTCAAGGTTTTATGGA
EST: GGATGGACATGGTCAACCAGCTTTGCTTTATATAGTCCCATTTACACTTG GAACCTTTTTGTCATTGGGAAAGAAGAGAGGTGAACTCAAGGTTTTATGGAEST: gi|207749000|gb|GD721411.1|GD721411
genomic: GGATGGACATGGTCAACCAGCTTTGCTTTATATAGTCCCATTTACACTTGgttagtaaaa ... gtatttgcagGAACCTTTCTGTCATTGGGAAAGAAGAGAGGTGAACTCAAGGTTTTATGGA
EST: GGATGGACATGGTCAACCAGCTTTGCTTTATATAGTCCCATTTACACTTG GAACCTTTCTGTCATTGGGAAAGAAGAGAGGTGAACTCAAGGTTTTATGGAEST: gi|208088299|gb|GD889467.1|GD889467
genomic: GGATGGACATGGTCAACCAGCTTTGCTTTATATAGTCCCATTTACACTTGgttagtaaaa ... gtatttgcagGAACCTTTCTGTCATTGGGAAAGAAGAGAGGTGAACTCAAGGTTTTATGGA
EST: GGATGGACATGGTCAACCAGCTTTGCTTTATATAGTCCCATTTACACTTG GAACCTTTTTGTCATTGGGAAAGAAGAGAGGTGAACTCAAGGTTTTANGGAEST: gi|22523945|gb|BU082756.1|BU082756
genomic: GGATGGACATGGTCAACCAGCTTTGCTTTATATAGTCCCATTTACACTTGgttagtaaaa ... gtatttgcagGAACCTTTCTGTCATTGGGAAAGAAGAGAGGTGAACTCAAGGTTTTATGGA
EST: GGATGGACATGGTCAACCAGCTTTGCTTTATATAGTCCCATTTACACTTG GAACCTTTTTGTCATTGGGAAAGAAGAGAGGTGAACTCEST: gi|254320215|gb|GR829403.1|GR829403
genomic: GGATGGACATGGTCAACCAGCTTTGCTTTATATAGTCCCATTTACACTTGgttagtaaaa ... gtatttgcagGAACCTTTCTGTCATTGGGAAAGAAGAGAGGTGAACTC
EST: GGATGGACATGGTCAACCAGCTTTGCTTTATATAGTCCCATTTACACTTG GAACCTTTCTGTCATTGGGAAAGAAGAGAGGTGAACTCAAGGTTTTATGGA
genomic: GGATGGACATGGTCAACCAGCTTTGCTTTATATAGTCCCATTTACACTTGgttagtaaaa ... gtatttgcagGAACCTTTCTGTCATTGGGAAAGAAGAGAGGTGAACTCAAGGTTTTATGGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTCTCCTTATCACATACGTGGCTTTGAACTTAATGGATGGACATGGTCAACCAGCTTTGCTTTATATAGTCCCATTTACACTTGgttagtaaaataattagacaaaactcaatttaagttgagtaataaaacactgattattgtgcaaaaagaaatatttggacctattccattgtctgttgaa
- - - - - - - - - - - - - - - - - GATGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -aaaagaaa