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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GAATGTGCCAGCGAAGATTTGAGAAGGCTTGCTTTGTTGGTGAGCCTGTTTTATCTTTTGACTCAGGACGGCCACAAGTTGATAATAAATGgtatatgttctttaatttttgcaagtcttttaagacacgattatttaactgtttatttatgcatagacattcttttacatttttattttttcaatttatg...

Basic information

species Glycine max
transcript GLYMA09G35270.1
intron # 13
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA09G35270.1 (Glycine max), 5'ss of exon 13
lower sequence: Vv03s0038g01320.t01 (Vitis vinifera), 5'ss of exon 14
GAATGTGCCAGCGAAGATTTGAGAAGGCTTGCTTTGTTGGTGAGCCTGTTTTATCTTTTGACTCAGGACGGCCACAAGTTGATAATAAATGgtatatg-ttctttaatttttgcaagtcttttaagacacg-attatttaactgtttatttatgcatagacattcttttacatttttattttttcaatttatg
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GCATGTGCTTACGAAGATTCGAGAAGGCTTGTGCACTTGGTGAACCTGTTTTGTCTTTCAACTCAGGAAGGCCACAGATTGACAATAAATGgtatttgattcttttgcaaatccaaattttctactatgcatgctttcttattacaggttttcaaatgcaaaatacat-gcttcaaaatatagtaagtgaaa-