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GGCATTTGCAACATACACAAATGCTATAAGGATAGTCAGGTTGGTGAATGATGTCGGTGCTGTTGTCAACAGTGATCCTGAGGTCAACGGCTACTTGAAGgtaacttaattttgtacaacttcctagataaagtccttttgttttgaaaatagaaaaagataggatactaagtgatttttccctatattatcatatactt...
species | Glycine max |
transcript | GLYMA08G45210.1 |
intron # | 13 |
splice site | 5' |
intron type | U2 |
EST: ATGTCGGTGCTGTTGTCAACAGTGATCCTGAGGTCAACGGCTACTTGAAG GTTGTGTTTGTCCCAAATTACAATGTGTCTEST: gi|22521900|gb|BU080711.1|BU080711
genomic: ATGTCGGTGCTGTTGTCAACAGTGATCCTGAGGTCAACGGCTACTTGAAGgtaacttaat ... tttttgtcagGTTGTGTTTGTCCCAAATTACAATGTGTCT
EST: ATGTCGGTGCTGTTGTCAACAGTGATCCTGAGGTCA-CGGCTACTTGAAG GTTGTGTTTGTCC-AAATTACAATGTGTCTGTGGCAGAGGTGCTGAATTCCEST: gi|26047983|gb|CA784613.1|CA784613
genomic: -TGTCGGTGCTGTTGTCAACAGTGATCCTGAGGTCAACGGCTACTTGAAGgtaacttaat ... tttttgtcagGTTGTGTTTGTCCCAAATTACAATGTGTCTGTGGCAGAGGTGCTGA-TTCC
EST: ATGTCGGTGCTGTTGTCAACAGTGATCCTGAGGTCAACGGCTACTTGAAG GTTGTGTTTGTCCCAAATTACAATGTGTCTGTGGCAGAGGTGCTGATTCCAEST: gi|15812555|gb|BI784830.1|BI784830
genomic: ATGTCGGTGCTGTTGTCAACAGTGATCCTGAGGTCAACGGCTACTTGAAGgtaacttaat ... tttttgtcagGTTGTGTTTGTCCCAAATTACAATGTGTCTGTGGCAGAGGTGCTGATTCCA
EST: ATGTCGGTGCTGTTGTCAACAGTGATCCTGAGGTCAACGGCTACTTGAAG GTTGTGTTTGTCCCAAATTACAATGTGTCTGTGGCAGAGGTGCTGATTCCA
genomic: ATGTCGGTGCTGTTGTCAACAGTGATCCTGAGGTCAACGGCTACTTGAAGgtaacttaat ... tttttgtcagGTTGTGTTTGTCCCAAATTACAATGTGTCTGTGGCAGAGGTGCTGATTCCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGCATTTGCAACATACACAAATGCTATAAGGATAGTCAGGTTGGTGAATGATGTCGGTGCTGTTGTCAACAGTGATCCTGAGGTCAACGGCTACTTGAAGgtaacttaattttgtacaacttcctagataaagtccttttgttttgaaaatagaaaaagataggatactaagtgatttttccctatattatcatatactt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGTT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - gaaaaaga