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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TACATACTCAAGGTGGGTGAAGGTCCTGTGGCTCAGTGTATTAGTGGCTTTACTGCTATAGATATTCCACCTCCACGTGGCCCTCTCTGgtacttaaatttcttcaactagccccatgatatttacctcacttttttttttcatcctctgttgtctttggattgtgactcatctgatatttgattctcactcaatggcatctccattaatgtag

Basic information

species Glycine max
transcript GLYMA07G39240.1
intron # 13
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|58015932|gb|CX702674.1|CX702674
EST:     ATTAGTGGCTTTACTGCTATAGATATTCCACCTCCACGTGGCCCTCTCTG                         GATCCTTGGTGATGTCTTCATGGGGCGTTATCACACAGTATTTGATTTTGG
genomic: ATTAGTGGCTTTACTGCTATAGATATTCCACCTCCACGTGGCCCTCTCTGgtacttaaat ... attaatgtagGATCCTTGGTGATGTCTTCATGGGGCGTTATCACACAGTATTTGATTTTGG
EST: gi|9564737|gb|BE474246.1|BE474246
EST:     ATTAGTGGCTTTACTGCTATAGATATTCCACCTCCACGTGGCCCTCTCTG                         GATCCTTGGTGATGTCTTCATGGGGCGTTATCACACAGTATTTGATTTTGG
genomic: ATTAGTGGCTTTACTGCTATAGATATTCCACCTCCACGTGGCCCTCTCTGgtacttaaat ... attaatgtagGATCCTTGGTGATGTCTTCATGGGGCGTTATCACACAGTATTTGATTTTGG
EST: gi|193450707|gb|FK413037.1|FK413037
EST:     ATTAGTGGCTTTACTGCTATAGATATTCCACCTCCACGTGGCCCTCTCTG                         GATCCTTGGTGATGTCTTCATGGGGCGTTATCACACAGTATTTGATTTTGG
genomic: ATTAGTGGCTTTACTGCTATAGATATTCCACCTCCACGTGGCCCTCTCTGgtacttaaat ... attaatgtagGATCCTTGGTGATGTCTTCATGGGGCGTTATCACACAGTATTTGATTTTGG
EST: gi|7588001|gb|AW703806.1|AW703806
EST:     CACGTGGCCCTCTCTG                         GATCCTTGGTGATGTCTTCATGGGGCGTTATCACACAGTATTTGATTTTGG
genomic: CACGTGGCCCTCTCTGgtacttaaat ... attaatgtagGATCCTTGGTGATGTCTTCATGGGGCGTTATCACACAGTATTTGATTTTGG
EST: gi|6341659|gb|AW164483.1|AW164483
EST:     ATTAGTGGCTTTACTGCTATAGATATTCCACCTCCACGTGGCCCTCTCTG                         GATCCTTGGTGATGTCTTCATGGGGCGTTATCACACAGTATTTGATTTTGG
genomic: ATTAGTGGCTTTACTGCTATAGATATTCCACCTCCACGTGGCCCTCTCTGgtacttaaat ... attaatgtagGATCCTTGGTGATGTCTTCATGGGGCGTTATCACACAGTATTTGATTTTGG
EST: gi|22928034|gb|BU545173.1|BU545173
EST:     CACGTGGCCCTCTCTG                         GATCCTTGGTGATGTCTTCATGGGGCGTTATCACACAGTATTTGATTTTGG
genomic: CACGTGGCCCTCTCTGgtacttaaat ... attaatgtagGATCCTTGGTGATGTCTTCATGGGGCGTTATCACACAGTATTTGATTTTGG
EST: gi|57575750|gb|CX548725.1|CX548725
EST:     ATTAGTGGCTTTACTGCTATAGATATTCCACCTCCACGTGGCCCTCTCTG                         GATCCTTGGTGATGTCTTCATGGGGCGTTATCACACAGTATTTGATTTTGG
genomic: ATTAGTGGCTTTACTGCTATAGATATTCCACCTCCACGTGGCCCTCTCTGgtacttaaat ... attaatgtagGATCCTTGGTGATGTCTTCATGGGGCGTTATCACACAGTATTTGATTTTGG