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ATGCGACAAATAGTTTATGTGGATATAAAATTGTTACTGGCCAGCCATCTGATAGGCTTGGAGAGGACTTTTCAGAGCATTATAATGATTTTACTGAGAGgtatcatcttttcttttgatagatttttgtagtaaactattcacctattctctggtttgtatctttaattcacccattctttggtttgtatttttaatat...
species | Glycine max |
transcript | GLYMA07G32480.1 |
intron # | 13 |
splice site | 5' |
intron type | U2 |
EST: TAATGATTTNNCTGAGAG ATTGAATAATGTTGAGGAGTTCACCCGGGCTACAATCAAGAAATTAACTCAEST: gi|192321129|gb|FK012455.1|FK012455
genomic: TAATGATTTTACTGAGAGgtatcatctt ... cttttattagATTGAATAATGTTGAGGAGTTCACCCGGGCTACAATCAAGAAATTAACTCA
EST: GATAGGCTTGGAGAGGACTTTTCAGAGCATTATAATGATTTTACTGAGAG ATTGAATAATGTTGAGGGGTTCACCCGGGCTACAATCAAGAAATTAACTCAEST: gi|57574959|gb|CX547934.1|CX547934
genomic: GATAGGCTTGGAGAGGACTTTTCAGAGCATTATAATGATTTTACTGAGAGgtatcatctt ... cttttattagATTGAATAATGTTGAGGAGTTCACCCGGGCTACAATCAAGAAATTAACTCA
EST: GATAGGCTTGGAGAGGACTTTTCAGAGCTTTATAATGATTTTACTGAGAG ATTGAATAATGTTGAGGAGTTCACCCGGGCTACAATCAAGAAATTAACTCAEST: gi|208108400|gb|GD904746.1|GD904746
genomic: GATAGGCTTGGAGAGGACTTTTCAGAGCATTATAATGATTTTACTGAGAGgtatcatctt ... cttttattagATTGAATAATGTTGAGGAGTTCACCCGGGCTACAATCAAGAAATTAACTCA
EST: TTATAATGATTTTACTGAGAG ATTGAATAATGTTGAGGAGTTCACCCGGGCTACAATCAAGAAATTAACTCAEST: gi|58016932|gb|CX703674.1|CX703674
genomic: TTATAATGATTTTACTGAGAGgtatcatctt ... cttttattagATTGAATAATGTTGAGGAGTTCACCCGGGCTACAATCAAGAAATTAACTCA
EST: GATAGGCTTGGAGAGGACTTTTCAGAGCTTTATAATGATTTTACTGAGAG ATTGAATAATGTTGAGGAGTTCACCCGGGCTACAATCAAGAAATTAACTCAEST: gi|193673321|gb|FK614340.1|FK614340
genomic: GATAGGCTTGGAGAGGACTTTTCAGAGCATTATAATGATTTTACTGAGAGgtatcatctt ... cttttattagATTGAATAATGTTGAGGAGTTCACCCGGGCTACAATCAAGAAATTAACTCA
EST: GATAGGCTTGGAGAGGACTTTTCAGAGCATTATAATGATTTTACTGAGAG ATTGAATAATGTTGAGGAGTTCACCCGGGCTACAATCAAGAAATTAACTCA
genomic: GATAGGCTTGGAGAGGACTTTTCAGAGCATTATAATGATTTTACTGAGAGgtatcatctt ... cttttattagATTGAATAATGTTGAGGAGTTCACCCGGGCTACAATCAAGAAATTAACTCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATGCGACAAATAGTTTATGTGGATATAAAATTGTTACTGGCCAGCCATCTGATAGGCTTGGAGAGGACTTTTCAGAGCATTATAATGATTTTACTGAGAGgtatcatcttttcttttgatagatttttgtagtaaactattcacctattctctggtttgtatctttaattcacccattctttggtttgtatttttaatat
- - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGCA