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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GATATCTACTTGGGGCTGATAAACCGTTTTATGCGTTAGCTTTACTTGGCCTAATAATTCCACAAGTCTTTTTTCAGgtaagtacagaattgcacacatgttaaaatattgtatacaatcatgtgactgctgcatactcgctaaaccgttctttctaaatttatgttagcatctcactggttcttatcatcttgtgccttgcag

Basic information

species Glycine max
transcript GLYMA07G18470.1
intron # 13
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|15589810|gb|BI674426.1|BI674426
EST:     TTTATGCGTTAGCTTTACTTGGCCTAATAATTCCACAGGTCTTTTTTCAG                         TTCAAGTATTTCCTCCAGGACCCTGTGAAATATGATGTTAAATATCAG
genomic: TTTATGCGTTAGCTTTACTTGGCCTAATAATTCCACAAGTCTTTTTTCAGgtaagtacag ... tgccttgcagTTCAAGTATTTCCTCAAGGACCCTGTGAAATATGATGTTAAATATCAG
EST: gi|192328988|gb|FK021399.1|FK021399
EST:     TTTATGCGTTAGCTTTACTTGGCCTAATAATTCCACAAGTCTTTTTTCAG                         TTCAAGTATTTCCTCAAGGACCCTGTGAAATATGATGTTAAATATCAG
genomic: TTTATGCGTTAGCTTTACTTGGCCTAATAATTCCACAAGTCTTTTTTCAGgtaagtacag ... tgccttgcagTTCAAGTATTTCCTCAAGGACCCTGTGAAATATGATGTTAAATATCAG