1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
GCGTCAAGTTCCAACCCCTTCAAGGCCATCTAGATCACTGGGAAACAGTATAACAAGAGTTGTAAGACGTGgtaagttctcaatttatcaactttgcccaagtttttatgatatatatagcttgttcttgtagtatatcaagacttgcaatatattggtaatcttgaacag
species | Glycine max |
transcript | GLYMA07G01440.1 |
intron # | 13 |
splice site | 5' |
intron type | U2 |
EST: AAGGCCATCTAGATCACTGGGAAACAGTATAACAAGAGTTGTAAGACGTG GAGCAGAAAGTGCCAGTGTCGACGCAAATGGGAATTCTTTTGATTTCACAAEST: gi|15814667|gb|BI786942.1|BI786942
genomic: AAGGCCATCTAGATCACTGGGAAACAGTATAACAAGAGTTGTAAGACGTGgtaagttctc ... tcttgaacagGAGCAGAAAGTGCCAGTGTCGACGCAAATGGGAATTCTTTTGATTTCACAA
EST: AAGGCCATCTAGATCACTGGGAAACAGTATAACAAGAGTTGTAAGACGTG GAGCAGAAAGTGCCAGTGTCGACGCAAATGGGAATTCTTTTGATTTCACAAEST: gi|193440105|gb|FK405398.1|FK405398
genomic: AAGGCCATCTAGATCACTGGGAAACAGTATAACAAGAGTTGTAAGACGTGgtaagttctc ... tcttgaacagGAGCAGAAAGTGCCAGTGTCGACGCAAATGGGAATTCTTTTGATTTCACAA
EST: AAGGCCATCTAGATCACTGGGAAACAGTATAACAAGAGTTGTAAGACGTG GAGCAGAAAGTGCCAGTGTC
genomic: AAGGCCATCTAGATCACTGGGAAACAGTATAACAAGAGTTGTAAGACGTGgtaagttctc ... tcttgaacagGAGCAGAAAGTGCCAGTGTC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCGTCAAGTTCCAACCCCTTCAAGGCCATCTAGATCACTGGGAAACAGTATAACAAGAGTTGTAAGACGTGgtaagttctcaatttatcaactttgcccaagtttttatgatatatatagcttgttcttgtagtatatcaagacttgcaatatattggtaatcttgaacag
- - - - - - - - - - - - - - - AGATCA