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CCCTGAAATATTTTGACAGCATTTAGATGTAGTGCCAAAAGAGGAGAACCATAACTTCCTAACTTTTGTGATTCCTCATGACAGAGAGGCGCTCATGACGgtaagctttctttcctcggcattgtccatttcctttaaattaactctaacacagggtttcaatattaactgttgttaaaatactgattgacatggaagca...
species | Glycine max |
transcript | GLYMA06G20360.2 |
intron # | 13 |
splice site | 5' |
intron type | U2 |
EST: TTTTAGTGATTCCTCATGACGGAGAGGCGCTCATGACG AATTTCTTTTCAGAGCTCCAAGATAGAGAAGAAGAATTTGGCATATCTGATEST: gi|193427222|gb|FK394802.1|FK394802
genomic: TTTT-GTGATTCCTCATGACAGAGAGGCGCTCATGACGgtaagctttc ... tcccaaacagAATTTCTTTTCAGAGCTCCAAGATAGAGAAGAAGAATTTGGCATATCTGAT
EST: TAAACTTCCTAACTTTTGTGATTCCTCATGACAGAGAGGCGCTCATGACG AATTTCTTTTCAGAGCTCCAAGATAGAGAAGAAGAATTTGGCATATCTGATEST: gi|120494823|gb|EH222990.1|EH222990
genomic: T-AACTTCCTAACTTTTGTGATTCCTCATGACAGAGAGGCGCTCATGACGgtaagctttc ... tcccaaacagAATTTCTTTTCAGAGCTCCAAGATAGAGAAGAAGAATTTGGCATATCTGAT
EST: ATAACTTCCTAACTTTTGTGATTCCTCATGACAGAGAGGCGCTCATGACG AATTTCTTTTCAGAGCTCCAAGATAGAGAAGAAGAATTTGGCATATCTGATEST: gi|37996900|gb|CF808489.1|CF808489
genomic: ATAACTTCCTAACTTTTGTGATTCCTCATGACAGAGAGGCGCTCATGACGgtaagctttc ... tcccaaacagAATTTCTTTTCAGAGCTCCAAGATAGAGAAGAAGAATTTGGCATATCTGAT
EST: ATAACTTCCTAACTTTTGTGATTCCTCATGACAGAGAGGCGCTCATGACG AATTTCTTTTCAGAGCTCCAAGATAGAGAAGAAGAATTTGGCATATCTGAT
genomic: ATAACTTCCTAACTTTTGTGATTCCTCATGACAGAGAGGCGCTCATGACGgtaagctttc ... tcccaaacagAATTTCTTTTCAGAGCTCCAAGATAGAGAAGAAGAATTTGGCATATCTGAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CCCTGAAATATTTTGACAGCATTTAGATGTAGTGCCAAAAGAGGAGAACCATAACTTCCTAACTTTTGTGATTCCTCATGACAGAGAGGCGCTCATGACGgtaagctttctttcctcggcattgtccatttcctttaaattaactctaacacagggtttcaatattaactgttgttaaaatactgattgacatggaagca
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGAGG