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GGGAGAGAGAGCTGGACAGGAAGCGCAAGGCTGATCATGATGAAAATGATGGTCCTGATCATGGTCCTAAAGATAGAAGAGGTCCTAAAGATAAAAGACGgtgagcaataatctatactcattggaaaagataaatagattgcagacatcttttcattctaatcaccataattggcttacaagaaaattcatttattacc...
species | Glycine max |
transcript | GLYMA05G25980.1 |
intron # | 13 |
splice site | 5' |
intron type | U2 |
EST: GGTCCTGATCATGGTCCTAAAGATAGAAGAGGTCCTAAAGATAAAAGACG GTCTACATCAACAGATGCCATGGATGTAGATGATAACTCAGCAGCTCAAGCEST: gi|208059101|gb|GD856151.1|GD856151
genomic: GGTCCTGATCATGGTCCTAAAGATAGAAGAGGTCCTAAAGATAAAAGACGgtgagcaata ... ttttggctagGTCTACATCAACAGATGCCATGGATGTAGATGATAACTCAGCAGCTCAAGC
EST: GGTCCTGATCATGGTCCTAAAGATAGAAGAGGTCCTAAAGATAAAAGACG GTCTACATCAACAGATGCCATGGATGTAGATGATAACTCAGCAGCTCAAGCEST: gi|207828744|gb|GD800869.1|GD800869
genomic: GGTCCTGATCATGGTCCTAAAGATAGAAGAGGTCCTAAAGATAAAAGACGgtgagcaata ... ttttggctagGTCTACATCAACAGATGCCATGGATGTAGATGATAACTCAGCAGCTCAAGC
EST: GGTCCTGATCATGGTCCTAAAGATAGAAGAGGTCCTAAAGATAAAAGACG GTCTACATCTAACAGATGCCATGGATGTAGATGATAACTCAGCAGCTCAAG
genomic: GGTCCTGATCATGGTCCTAAAGATAGAAGAGGTCCTAAAGATAAAAGACGgtgagcaata ... ttttggctagGTCTACATC-AACAGATGCCATGGATGTAGATGATAACTCAGCAGCTCAAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGGAGAGAGAGCTGGACAGGAAGCGCAAGGCTGATCATGATGAAAATGATGGTCCTGATCATGGTCCTAAAGATAGAAGAGGTCCTAAAGATAAAAGACGgtgagcaataatctatactcattggaaaagataaatagattgcagacatcttttcattctaatcaccataattggcttacaagaaaattcatttattacc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ggaaaaga
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - acaagaaa