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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TGTATACATTTGCTTGAGAAATTTCAGTCAGCGGCTTCGGAATTTCTCTTTAACCCTCTTTGCgtatgtgttctttaccctaattattgaaattctatgttgattggttttggattattttgttttttatttggtgactgctatctttttttcttttttttttcttttctgaattttccccatttttgtatcag

Basic information

species Glycine max
transcript GLYMA05G25780.2
intron # 13
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|193704399|gb|FK644793.1|FK644793
EST:     TTGAGAAATTTCAGTCAGCGGCTTCGGAATTTCTCTTTAACCCTCTTTGC                         GTGGCTTGGCAAGATTACTTTGGAGACATACATTTCCCAGTTTCATATTTG
genomic: TTGAGAAATTTCAGTCAGCGGCTTCGGAATTTCTCTTTAACCCTCTTTGCgtatgtgttc ... tttgtatcagGTGGCTTGGCAAGATTACTTTGGAGACATACATTTCCCAGTTTCATATTTG
EST: gi|207767664|gb|GD739740.1|GD739740
EST:     TTGAGAAATTTCAGTCAGCGGCTTCGGAATTTCTCTTTAACCCTCTTTGC                         GTGGCTTGGCAAGATTACTTTGGAGACATACATTTCCCAGTTTCATATTTG
genomic: TTGAGAAATTTCAGTCAGCGGCTTCGGAATTTCTCTTTAACCCTCTTTGCgtatgtgttc ... tttgtatcagGTGGCTTGGCAAGATTACTTTGGAGACATACATTTCCCAGTTTCATATTTG
EST: gi|207740974|gb|GD714352.1|GD714352
EST:     TTGAGAAATTTCAGTCAGCGGCTTCGGAATTTCTCTTTAACCCTCTTTGC                         GTGGCTTGGCAAGATTACTTTGGAGACATACATTTCCCAGTTTCATATTTT
genomic: TTGAGAAATTTCAGTCAGCGGCTTCGGAATTTCTCTTTAACCCTCTTTGCgtatgtgttc ... tttgtatcagGTGGCTTGGCAAGATTACTTTGGAGACATACATTTCCCAGTTTCATATTT-
EST: gi|208104675|gb|GD905044.1|GD905044
EST:     TTGAGAAATTTCAGTCAGCGGTTTCGGAATTTCTCTTTAACCCTCTTTGC                         GTGGCTTGGCAAGATTACTTTGGAGACATACATTTCCCAGTTTCATATTTG
genomic: TTGAGAAATTTCAGTCAGCGGCTTCGGAATTTCTCTTTAACCCTCTTTGCgtatgtgttc ... tttgtatcagGTGGCTTGGCAAGATTACTTTGGAGACATACATTTCCCAGTTTCATATTTG
EST: gi|193464012|gb|FK427880.1|FK427880
EST:     TTGAGAAATTTCAGTCAGCGGCTTCGGAATTTCTCTTTAACCCTCTTTGC                         GTGGCTTGGCAAGATTACTTTGGAGACATACATTTCCCAGTTTCATATTTG
genomic: TTGAGAAATTTCAGTCAGCGGCTTCGGAATTTCTCTTTAACCCTCTTTGCgtatgtgttc ... tttgtatcagGTGGCTTGGCAAGATTACTTTGGAGACATACATTTCCCAGTTTCATATTTG
EST: gi|208267765|gb|GE071182.1|GE071182
EST:     TTGAGAAATTTCAGTCAGCGGCTTCGGAATTTCTCTTTAACCCTCTTTGC                         GTGGCTTGGCAAGATTACTTTGGAGACATACATTTCCCAGTTTCATATTTG
genomic: TTGAGAAATTTCAGTCAGCGGCTTCGGAATTTCTCTTTAACCCTCTTTGCgtatgtgttc ... tttgtatcagGTGGCTTGGCAAGATTACTTTGGAGACATACATTTCCCAGTTTCATATTTG
EST: gi|208336761|gb|GE135151.1|GE135151
EST:     TTGAGAAATTTCAGTCAGCGGCTTCGGAATTTCTCTTTAACCCTCTTTGC                         GTGGCTTGGCAAGATTACTTTGGAGACATACATTTCCCAGTTTCATATTTG
genomic: TTGAGAAATTTCAGTCAGCGGCTTCGGAATTTCTCTTTAACCCTCTTTGCgtatgtgttc ... tttgtatcagGTGGCTTGGCAAGATTACTTTGGAGACATACATTTCCCAGTTTCATATTTG
EST: gi|16996654|gb|BM086026.1|BM086026
EST:     TTGAGAAATTTCAGTCAGCGGCTTCGGAATTTCTCTTTAACCCTCTTTGC                         GTGGCTTGGCAAGATTACTTTGGAGACATACATTTCCCAGTTTCATATTTG
genomic: TTGAGAAATTTCAGTCAGCGGCTTCGGAATTTCTCTTTAACCCTCTTTGCgtatgtgttc ... tttgtatcagGTGGCTTGGCAAGATTACTTTGGAGACATACATTTCCCAGTTTCATATTTG