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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GAGAAAGTGTTATGCAGAATTTGTTTTGAGGGAGAGATTAACGTTGTATTGCTCCCATGTAGGCATCGTGTCCTTTGCAGgtgagatctaatatgtgatggtcaatgagacaacttcgtgcattgcatatagtttggccttatgcttttttatttatctatttttttcttgctcaaaataattttctccttatgcctgctttccatgtactgcag

Basic information

species Glycine max
transcript GLYMA05G07960.1
intron # 13
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA05G07960.1 (Glycine max), 5'ss of exon 13
lower sequence: Vv17s0000g04160.t01 (Vitis vinifera), 5'ss of exon 13
GAGAAAGTGTTATGCAGAATTTGTTTTGAGGGAGAGATTAACGTTGTATTGCTCCCATGTAGGCATCGTGTCCTTTGCAGgtgagatctaatatgtgatggtcaatgagacaacttcgtgcattgcatatagtttggccttatgcttttttatttatctatttttttcttgctcaaaataattttctccttatgcctgctttccatgtactgcag
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GAAAAAATTTTATGTAGAATTTGCTTTGAAGGAGAGATCAGCGTGGTTCTTCTTCCATGCAGGCATCGTATCCTTTGCAGgtatgttcctctgttttatcgacccc----cctcccctgggtttccccactttttaatctctt-tattgacatccaatcatatgccatatctgcag---------------------------------------