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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GCTCTATATGATGCATTAATGAGGCAAGAAGAGCTGCTTGCTTACATTGACAGACAAGAAGAAGCCAAGTTGCGGgtaagttggcaagtctatcttttgaataaagttaaaaccttgacatgcatcaaaattttcatctttctgtttcctgtgtttttatcag

Basic information

species Glycine max
transcript GLYMA04G01220.1
intron # 13
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA04G01220.1 (Glycine max), 5'ss of exon 13
lower sequence: Vv03s0038g04470.t01 (Vitis vinifera), 5'ss of exon 14
GCTCTATATGATGCATTAATGAGGCAAGAAGAGCTGCTTGCTTACATTGACAGACAAGAAGAAGCCAAGTTGCGGgtaagttggcaagtctatctttt--gaataaagttaaaaccttgacatgcatcaaaattttcatctt---tctgtttcctgtgtttttatcag-------
|| ||  |||| ||  || ||||||| || ||  ||||||||||||| ||||| || |||||||| ||||| |||||||||||   ||| |  |   |  |  | || ||  ||   |  ||    ||||||   || || |   ||  | |  ||||    |  ||        
GCCCTGCATGAAGCTCTATTGAGGCAGGAGGAATTGCTTGCTTACATAGACAGTCAGGAAGAAGCTAAGTTTCGGgtaagttgagtagttttacacataggggtgaacttctaattctttcagctctcaaaagactcctcctaggtcaatgttttgtgaagcttacattgcataa
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|193622905|gb|FK572379.1|FK572379
EST:     AAGAGCTGCTTGCTTACATTGACAGACAAGAAAAGAAAGCCAAGTTGCGG                         AAAAAGAAGTTT-GCTGGTGAGATTTATGAATGGGAAAGAGATTCTGCAGA
genomic: AAGAGCTGCTTGCTTACATTGACAGACAAGAA--GAA-GCCAAGTTGCGGgtaagttggc ... tttttatcagAAAAAGAAGTTTTGCTGGTGAGATTTATGAATGGGAAAGAGATTCTGCAGA
EST: gi|193305313|gb|FK273218.1|FK273218
EST:     AAGAAGAGCTGCTTGCTTACATTGACAGACAAGAAGAAGCCAAGTTGCGG                         AAAA-GAAGTTTTGCTGGTGAGATTTATGAATGGGAAAGAGATTCTGCAGA
genomic: AAGAAGAGCTGCTTGCTTACATTGACAGACAAGAAGAAGCCAAGTTGCGGgtaagttggc ... tttttatcagAAAAAGAAGTTTTGCTGGTGAGATTTATGAATGGGAAAGAGATTCTGCAGA
EST: gi|209712292|gb|BW668486.1|BW668486
EST:     AAGAAGAGCTGCTTGCTTACATTGACAGACAAGAAGAAGCCAAGTTGCGG                         AAAAAGAAGTTTTGCTGGTGAGATTTATGAATGGGAAAGAGATTCTGCAGA
genomic: AAGAAGAGCTGCTTGCTTACATTGACAGACAAGAAGAAGCCAAGTTGCGGgtaagttggc ... tttttatcagAAAAAGAAGTTTTGCTGGTGAGATTTATGAATGGGAAAGAGATTCTGCAGA
EST: gi|193686728|gb|FK626107.1|FK626107
EST:     AAGAAGAGCTGCTTGCTTACATTGACAGACAAGAAGAAGCCAAGTTGCGG                         AAAAAGAAGTTTTGCTGGTGAGATTTATGAATGGGAAAGAGATTCTGCAGA
genomic: AAGAAGAGCTGCTTGCTTACATTGACAGACAAGAAGAAGCCAAGTTGCGGgtaagttggc ... tttttatcagAAAAAGAAGTTTTGCTGGTGAGATTTATGAATGGGAAAGAGATTCTGCAGA
EST: gi|193399278|gb|FK364766.1|FK364766
EST:     AAGAAGAGCTGCTTGCTTACATTGACAGACAAGAAGAAGCCAAGTTGCGG                         AAAA-GAAGTTTTGCTGGTGAGATTTATGAATGGGAAAGAGATTCTGCAGA
genomic: AAGAAGAGCTGCTTGCTTACATTGACAGACAAGAAGAAGCCAAGTTGCGGgtaagttggc ... tttttatcagAAAAAGAAGTTTTGCTGGTGAGATTTATGAATGGGAAAGAGATTCTGCAGA
EST: gi|208278241|gb|GE077054.1|GE077054
EST:     AAGAAGAGCTGCTTGCTTACATTGACAGACAAGAAGAAGCCAAGTTGCGG                         AAAAAGAAGTTTTGCTGGTGAGATTTATGAATGGGAAAGAGATTCTGCAGA
genomic: AAGAAGAGCTGCTTGCTTACATTGACAGACAAGAAGAAGCCAAGTTGCGGgtaagttggc ... tttttatcagAAAAAGAAGTTTTGCTGGTGAGATTTATGAATGGGAAAGAGATTCTGCAGA
EST: gi|207755392|gb|GD729427.1|GD729427
EST:     CCAAGTTGCGG                         AAAAAGAAGTTTTGCTGGTGAGATTTATGAATGGGAAAGAGATTCTGCAGA
genomic: CCAAGTTGCGGgtaagttggc ... tttttatcagAAAAAGAAGTTTTGCTGGTGAGATTTATGAATGGGAAAGAGATTCTGCAGA
EST: gi|207766724|gb|GD738352.1|GD738352
EST:     AAGAAGAGCTGCTTGCTTACATTGACAGACAAGAAGAAGCCAAGTTGCGG                         AAAAAGAAGTTTTGCTGGTGAGATTTATGAATGGGAAAGAGATTCTGCAGA
genomic: AAGAAGAGCTGCTTGCTTACATTGACAGACAAGAAGAAGCCAAGTTGCGGgtaagttggc ... tttttatcagAAAAAGAAGTTTTGCTGGTGAGATTTATGAATGGGAAAGAGATTCTGCAGA
EST: gi|207703930|gb|GD685920.1|GD685920
EST:     AAGAAGAGCTGCTTGCTTACATTGACAGACAAGAAGAAGCCAAGCTGCGG                         AAAAAGAAGTTTTGCTGGTGAGATTTATGAATGGGAAAGAGATTCTGCAGA
genomic: AAGAAGAGCTGCTTGCTTACATTGACAGACAAGAAGAAGCCAAGTTGCGGgtaagttggc ... tttttatcagAAAAAGAAGTTTTGCTGGTGAGATTTATGAATGGGAAAGAGATTCTGCAGA
EST: gi|209728327|gb|BW658539.1|BW658539
EST:     AAGAAGAGCTGCTTGCTTACATTGACAGACAAGAAGAAGCCAAGTTGCGG                         AAAAAGAAGTTTTGCTGGTGAGATTTATGAATGGGAAAGAGATTCTGCAGA
genomic: AAGAAGAGCTGCTTGCTTACATTGACAGACAAGAAGAAGCCAAGTTGCGGgtaagttggc ... tttttatcagAAAAAGAAGTTTTGCTGGTGAGATTTATGAATGGGAAAGAGATTCTGCAGA
EST: gi|208082485|gb|GD882563.1|GD882563
EST:     AAGAAGAGCTGCTTGCTTACATTGACAGACAAGAAGAAGCCAAGTTGCGG                         AAAAAGAAGTTTTGCTGGTGAGATTTATGAATGGGAAAGAGATTCTGCAGA
genomic: AAGAAGAGCTGCTTGCTTACATTGACAGACAAGAAGAAGCCAAGTTGCGGgtaagttggc ... tttttatcagAAAAAGAAGTTTTGCTGGTGAGATTTATGAATGGGAAAGAGATTCTGCAGA
EST: gi|208162334|gb|GD962211.1|GD962211
EST:     AAGAAGAGCTGCTTGCTTACATTGACAGACAAGAAGAAGCCAAGTTGCGG                         AAAAAGAAGTTTTGCTGGTGAGATTTATGAATGGGAAAGAGATTCTGCAGA
genomic: AAGAAGAGCTGCTTGCTTACATTGACAGACAAGAAGAAGCCAAGTTGCGGgtaagttggc ... tttttatcagAAAAAGAAGTTTTGCTGGTGAGATTTATGAATGGGAAAGAGATTCTGCAGA
EST: gi|208052022|gb|GD853433.1|GD853433
EST:     AAGAAGAGCTGCTTGCTTACATTGACAGACAAGAAGAAGCCAAGTTGCGG                         AAAAAGAAGTTTTGCTGGTGAGATTTATGAATGGGAAAGAGATTCTGCAGA
genomic: AAGAAGAGCTGCTTGCTTACATTGACAGACAAGAAGAAGCCAAGTTGCGGgtaagttggc ... tttttatcagAAAAAGAAGTTTTGCTGGTGAGATTTATGAATGGGAAAGAGATTCTGCAGA
EST: gi|209716698|gb|BW679567.1|BW679567
EST:     AAGAAGAGCTGCTTGCTTACATTGACAGACAAGAAGAAGCCAAGTTGCGG                         AAAAAGAAGTTTTGCTGGTGAGATTTTTGAATGGGAAAGAGATTCTGCAGA
genomic: AAGAAGAGCTGCTTGCTTACATTGACAGACAAGAAGAAGCCAAGTTGCGGgtaagttggc ... tttttatcagAAAAAGAAGTTTTGCTGGTGAGATTTATGAATGGGAAAGAGATTCTGCAGA
EST: gi|207796671|gb|GD768397.1|GD768397
EST:     AAGAAGAGCTGCTTGCTTACATTGACAGACAAGAAGAAGCCAAGTTGCGG                         AAAAAGAAGTTTTGCTGGTGAGATTTATGAATGGGAAAGAGATTCTGCAGA
genomic: AAGAAGAGCTGCTTGCTTACATTGACAGACAAGAAGAAGCCAAGTTGCGGgtaagttggc ... tttttatcagAAAAAGAAGTTTTGCTGGTGAGATTTATGAATGGGAAAGAGATTCTGCAGA
EST: gi|193348418|gb|FK317676.1|FK317676
EST:     AAGAAGAGCTGCTTGCTTACATTGACAGACAAGAAGAAGCCAAGTTGCGG                         AAAAAGAAGTTTTGCTGGTGAGATTTATGAATGGGAAAGAGATTCTGCAGA
genomic: AAGAAGAGCTGCTTGCTTACATTGACAGACAAGAAGAAGCCAAGTTGCGGgtaagttggc ... tttttatcagAAAAAGAAGTTTTGCTGGTGAGATTTATGAATGGGAAAGAGATTCTGCAGA
EST: gi|207729874|gb|GD706426.1|GD706426
EST:     AAGAAGAGCTGCTTGCTTACATTGACAGACAAGAAGAAGCCAAGTTGCGG                         AAAAAGAAGTTTTGCTGGTGAGATTTATGAAATGGGAAAGAGATTCTGCAG
genomic: AAGAAGAGCTGCTTGCTTACATTGACAGACAAGAAGAAGCCAAGTTGCGGgtaagttggc ... tttttatcagAAAAAGAAGTTTTGCTGGTGAGATTTATGAA-TGGGAAAGAGATTCTGCAG
EST: gi|208317139|gb|GE113204.1|GE113204
EST:     AAGAAGAGCTGCTTGCTTACATTGACAGACAAGAAGAAGCCAAGTTGCGG                         AAAAAGAAGTTTTGCTGGTGAGATTTATGAATGGGAAAGAGATTCTGCAGA
genomic: AAGAAGAGCTGCTTGCTTACATTGACAGACAAGAAGAAGCCAAGTTGCGGgtaagttggc ... tttttatcagAAAAAGAAGTTTTGCTGGTGAGATTTATGAATGGGAAAGAGATTCTGCAGA
EST: gi|208329694|gb|GE130519.1|GE130519
EST:     AAGAAGAGCTGCTTGCTTACATTGACAGACAAGAAGAAGCCAAGTTGCGG                         AAAAAGAAGTTTTGCTGGTGAGATTTATGAATGGGAAAGAGATTCTGCAGA
genomic: AAGAAGAGCTGCTTGCTTACATTGACAGACAAGAAGAAGCCAAGTTGCGGgtaagttggc ... tttttatcagAAAAAGAAGTTTTGCTGGTGAGATTTATGAATGGGAAAGAGATTCTGCAGA
EST: gi|207800687|gb|GD775958.1|GD775958
EST:     AAGAAGAGCTGCTTGCTTACATTGACAGACAAGAAGAAGCCAAGTTGCGG                         AAAAAGAAGTTTTGCTGGTGAGATTTATGAATGGGAAAGAGATTCTGCAGA
genomic: AAGAAGAGCTGCTTGCTTACATTGACAGACAAGAAGAAGCCAAGTTGCGGgtaagttggc ... tttttatcagAAAAAGAAGTTTTGCTGGTGAGATTTATGAATGGGAAAGAGATTCTGCAGA
EST: gi|209704788|gb|BW673440.1|BW673440
EST:     AAGAAGAGCTGCTTGCTTACATTGACAGACAAGAAGAAGCCAAGTTGCGG                         AAAAAGAAGTTTTGCTGGTGAGATTTATGAATGGGAAAGAGATTCTGCAGA
genomic: AAGAAGAGCTGCTTGCTTACATTGACAGACAAGAAGAAGCCAAGTTGCGGgtaagttggc ... tttttatcagAAAAAGAAGTTTTGCTGGTGAGATTTATGAATGGGAAAGAGATTCTGCAGA
EST: gi|193373435|gb|FK340207.1|FK340207
EST:     AAGAAGAGCTGCTTGCTTACATTGACAGACAAGAAGAAGCCAAGTTGCGG                         AAAA-GAAGTTTTGCTGGTGAGATTTATGAATGGGAAAGAGATTCTGCAGA
genomic: AAGAAGAGCTGCTTGCTTACATTGACAGACAAGAAGAAGCCAAGTTGCGGgtaagttggc ... tttttatcagAAAAAGAAGTTTTGCTGGTGAGATTTATGAATGGGAAAGAGATTCTGCAGA
EST: gi|208093668|gb|GD893085.1|GD893085
EST:     AAGAAGAGCTGCTTGCTTACATTGACAGACAAGAAGAAGCCAAGTTGCGG                         AAAAAGAAGTTTTGCTGGTGAGATTTATGAATGGGAAAAGAGATTCTGCAG
genomic: AAGAAGAGCTGCTTGCTTACATTGACAGACAAGAAGAAGCCAAGTTGCGGgtaagttggc ... tttttatcagAAAAAGAAGTTTTGCTGGTGAGATTTATGAATGGGAAA-GAGATTCTGCAG
EST: gi|208301407|gb|GE099842.1|GE099842
EST:     AAGAAGAGCTGCTTGCTTACATTGACAGACAAGAAGAAGCCAAGTTGCGG                         AAAAAGAAGTTTTGCTGGTGAGATTTATGAATGGGAAAGAGATTCTGCAGA
genomic: AAGAAGAGCTGCTTGCTTACATTGACAGACAAGAAGAAGCCAAGTTGCGGgtaagttggc ... tttttatcagAAAAAGAAGTTTTGCTGGTGAGATTTATGAATGGGAAAGAGATTCTGCAGA
EST: gi|193427961|gb|FK397935.1|FK397935
EST:     AAGAAGAGCTGCTTGCTTACATTGACAGACAAGAAGAAGCCAAGTTGCGG                         AAAAAGAAGTTTTGCTGGTGAGATTTATGAATGGGAAAGAGATTCTGCAGA
genomic: AAGAAGAGCTGCTTGCTTACATTGACAGACAAGAAGAAGCCAAGTTGCGGgtaagttggc ... tttttatcagAAAAAGAAGTTTTGCTGGTGAGATTTATGAATGGGAAAGAGATTCTGCAGA
EST: gi|207769949|gb|GD741815.1|GD741815
EST:     AAGAAGAGCTGCTTGCTTACATTGACATACAAGAAGAAGCCAAGTTGCGG                         AAAAAGAAGTTTTGCTGGTGAGATTTATGAATGGGAAAGAGATTCTGCAGA
genomic: AAGAAGAGCTGCTTGCTTACATTGACAGACAAGAAGAAGCCAAGTTGCGGgtaagttggc ... tttttatcagAAAAAGAAGTTTTGCTGGTGAGATTTATGAATGGGAAAGAGATTCTGCAGA
EST: gi|207698212|gb|GD679597.1|GD679597
EST:     AAGAAGAGCTGCTTGCTTACATTGACAGACAAGAAGAAGCCAAGTTGCGG                         AAAAAGAAGTTTTGCTGGTGAGATTTATGAATGGGAAAGAGATTCTGCAGA
genomic: AAGAAGAGCTGCTTGCTTACATTGACAGACAAGAAGAAGCCAAGTTGCGGgtaagttggc ... tttttatcagAAAAAGAAGTTTTGCTGGTGAGATTTATGAATGGGAAAGAGATTCTGCAGA
EST: gi|207699689|gb|GD678946.1|GD678946
EST:     AAGAAGAGCTGCTTGCTTACATTGACAGACAAGAAGAAGCCAAGTTGCGG                         AAAAAGAAGTTTTGCTGGTGAGATTTATGAATGGGAAAGAGATTCTGCAGA
genomic: AAGAAGAGCTGCTTGCTTACATTGACAGACAAGAAGAAGCCAAGTTGCGGgtaagttggc ... tttttatcagAAAAAGAAGTTTTGCTGGTGAGATTTATGAATGGGAAAGAGATTCTGCAGA
EST: gi|193319806|gb|FK285201.1|FK285201
EST:     AAGAAGAGCTGCTTGCTTACATTGACAGACAAGAAGAAGCCAAGTTGCGG                         AAAGAGAAGTTTTGCTGGTGAGATTTATGAATGGGAAAGAGATTCTGCAGA
genomic: AAGAAGAGCTGCTTGCTTACATTGACAGACAAGAAGAAGCCAAGTTGCGGgtaagttggc ... tttttatcagAAAAAGAAGTTTTGCTGGTGAGATTTATGAATGGGAAAGAGATTCTGCAGA
EST: gi|193327995|gb|FK296886.1|FK296886
EST:     AAGAAGAGCTGCTTGCTTACATTGACAGACAAGAAGAAGCCAAGTTGCGG                         AAAGAGAAGTTTTGCTGGTGAGATTTATGAATGGGAAAGAGATTCTGCAGA
genomic: AAGAAGAGCTGCTTGCTTACATTGACAGACAAGAAGAAGCCAAGTTGCGGgtaagttggc ... tttttatcagAAAAAGAAGTTTTGCTGGTGAGATTTATGAATGGGAAAGAGATTCTGCAGA
EST: gi|193547062|gb|FK504065.1|FK504065
EST:     AAGAAGAGCTGCTTGCTTACATTGACAGACAAGAAGAAGCCAAGTTGCGG                         AAAAAGAAGTTTTGCTGGTGAGATTTATGAATGGGAAAGAGATTCTGCAGA
genomic: AAGAAGAGCTGCTTGCTTACATTGACAGACAAGAAGAAGCCAAGTTGCGGgtaagttggc ... tttttatcagAAAAAGAAGTTTTGCTGGTGAGATTTATGAATGGGAAAGAGATTCTGCAGA
EST: gi|193429197|gb|FK398457.1|FK398457
EST:     AAGAAGAGCTGCTTGCTTACATTGACAGACAAGAAGAAGCCAAGTTGCGG                         AAAAAGAAGTTTTGCTGGTGAGATT
genomic: AAGAAGAGCTGCTTGCTTACATTGACAGACAAGAAGAAGCCAAGTTGCGGgtaagttggc ... tttttatcagAAAAAGAAGTTTTGCTGGTGAGATT
EST: gi|207737948|gb|GD717420.1|GD717420
EST:     TTGACAGACAAGAAGAAGCCAAGTTGCGG                         AAAAAGAAGTTTTGCTGGTGAGATTTATGAATGGGAAAGAGATTCTGCAGA
genomic: TTGACAGACAAGAAGAAGCCAAGTTGCGGgtaagttggc ... tttttatcagAAAAAGAAGTTTTGCTGGTGAGATTTATGAATGGGAAAGAGATTCTGCAGA
EST: gi|193552942|gb|FK505785.1|FK505785
EST:     AAGAAGAGCTGCTTGCTTACATTGACAGACAAGAAGAAGCCAAGTTGCGG                         AAAAAGAAGTTTTGCTGGTGAGATTTATGAATGGGAAAGAGATTCTGCAGA
genomic: AAGAAGAGCTGCTTGCTTACATTGACAGACAAGAAGAAGCCAAGTTGCGGgtaagttggc ... tttttatcagAAAAAGAAGTTTTGCTGGTGAGATTTATGAATGGGAAAGAGATTCTGCAGA
EST: gi|16348272|gb|BI973867.1|BI973867
EST:     AAGAAGAGCTGCTTGCTTACATTGACAGACAAGAAGAAGCCAAGTTGCGG                         AAAAAGAAGTTTTGCTGGTGAGA
genomic: AAGAAGAGCTGCTTGCTTACATTGACAGACAAGAAGAAGCCAAGTTGCGGgtaagttggc ... tttttatcagAAAAAGAAGTTTTGCTGGTGAGA
EST: gi|208028029|gb|GD824075.1|GD824075
EST:     AAGAAGAGCTGCTTGCTTACATTGACAGACAAGAAGAAGCCAAGTTGCGG                         AAAAAGAAGTTTTGCTGGTGAGATTTAATGAATGGGAAAGAGATTCTGCAG
genomic: AAGAAGAGCTGCTTGCTTACATTGACAGACAAGAAGAAGCCAAGTTGCGGgtaagttggc ... tttttatcagAAAAAGAAGTTTTGCTGGTGAGATTTA-TGAATGGGAAAGAGATTCTGCAG
EST: gi|192306576|gb|FG996238.1|FG996238
EST:     AAGAAGAGCTGCTTGCTTACATTGACAGACAAGAAGAAGCCAAGTTGCGG                         AAAAAGAAGTTTTGCTGGTGAGATTTATGAATGGGAAAGAGATTTTGCAGA
genomic: AAGAAGAGCTGCTTGCTTACATTGACAGACAAGAAGAAGCCAAGTTGCGGgtaagttggc ... tttttatcagAAAAAGAAGTTTTGCTGGTGAGATTTATGAATGGGAAAGAGATTCTGCAGA
EST: gi|193690401|gb|FK632710.1|FK632710
EST:     AAGAAGAGCTGCTTGCTTACATTGACAGACAAGAAGAAGCCAAGTTGCGG                         AAAAAGAAGTTTTGCTGGTGAGATTTATGAATGGGAAAGAGATTTTGCAGA
genomic: AAGAAGAGCTGCTTGCTTACATTGACAGACAAGAAGAAGCCAAGTTGCGGgtaagttggc ... tttttatcagAAAAAGAAGTTTTGCTGGTGAGATTTATGAATGGGAAAGAGATTCTGCAGA
EST: gi|193365573|gb|FK329812.1|FK329812
EST:     AAGAAGAGCTGCTTGCTTACATTGACAGACAAGAAGAAGCCAAGTTGCGG                         AAAAAGAAGTTTTGCTGGTGAGATTTATGAATGGGAAAGAGATTCTGCAGA
genomic: AAGAAGAGCTGCTTGCTTACATTGACAGACAAGAAGAAGCCAAGTTGCGGgtaagttggc ... tttttatcagAAAAAGAAGTTTTGCTGGTGAGATTTATGAATGGGAAAGAGATTCTGCAGA
EST: gi|192324737|gb|FK018773.1|FK018773
EST:     AAGAAGAGCTGCTTGCTTACATTGACAGACAAGAAGAAGCCAAGTTGCGG                         AAAAAGAAGTTTTGCTGGTGAGATTTATGAATGGGAAAGAGATTCTGCAGA
genomic: AAGAAGAGCTGCTTGCTTACATTGACAGACAAGAAGAAGCCAAGTTGCGGgtaagttggc ... tttttatcagAAAAAGAAGTTTTGCTGGTGAGATTTATGAATGGGAAAGAGATTCTGCAGA

Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
GCTCTATATGATGCATTAATGAGGCAAGAAGAGCTGCTTGCTTACATTGACAGACAAGAAGAAGCCAAGTTGCGGgtaagttggcaagtctatcttttgaataaagttaaaaccttgacatgcatcaaaattttcatctttctgtttcctgtgtttttatcag

- - - - - - - - - - - -  AAGAAG
- - - - - - - - - - - - - -  AGAGCT
- - - - - - - - - - - - - - -  AGCTGC
- - - - - - - - - - - - - - - - GCTGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - -  AAGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AGAAGC