1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' |
GTCGTGTTTGTGTCCCTATTGATCCAAAACGGTGCGAGGAGTTTGATCCTACTACAGTACCCACCCTTTCACAGgtaaacttattctgcaatgataatttttttatatgcattccagggagagaaaaactttccttgggctcaattatttgcttagttttcaataaggatgttt...
species | Glycine max |
transcript | GLYMA02G45610.1 |
intron # | 13 |
splice site | 5' |
intron type | U2 |
EST: TTGATCCTACTACAGTACCCACCCTTTCTACAG CTGATAGAAGAGCTTAATTATGAAGGCTCAAGAGCTGATGCTGATGGTGEST: gi|298181814|gb|HO025989.1|HO025989
genomic: TTGATCCTACTACAGTACCCACCCTTTC-ACAGgtaaacttat ... aacattgcagCTGATAGAAGAGCTTAATTATGAAGGCTCAAGAGCTGATGCTGATGGTG
EST: CAAAACGGTGCGAGGAGTTTGATCCTACTACAGTACCCACCCTTTCACAG CTGATAGAAGAGEST: gi|151404405|gb|EV274215.1|EV274215
genomic: CAAAACGGTGCGAGGAGTTTGATCCTACTACAGTACCCACCCTTTCACAGgtaaacttat ... aacattgcagCTGATAGAAGAG
EST: CAAAACGGTGCGAGGAGTTTGATCCTACTACAGTACCCACCCTTTCACAG CTGATAGAAGAGCTTAATTATGAAGGCTCAAGAGCTGATGCTGATGGTGEST: gi|58023254|gb|CX709995.1|CX709995
genomic: CAAAACGGTGCGAGGAGTTTGATCCTACTACAGTACCCACCCTTTCACAGgtaaacttat ... aacattgcagCTGATAGAAGAGCTTAATTATGAAGGCTCAAGAGCTGATGCTGATGGTG
EST: CAAAACGGTGCGAGGAGTTTGATCCTACTACAGTACCCACCCTTTCACAG CTGATAGAAGAGCTTAATTATGAAGGCTCAAGAGCTGATGCTGATGGTGEST: gi|193320839|gb|FK284778.1|FK284778
genomic: CAAAACGGTGCGAGGAGTTTGATCCTACTACAGTACCCACCCTTTCACAGgtaaacttat ... aacattgcagCTGATAGAAGAGCTTAATTATGAAGGCTCAAGAGCTGATGCTGATGGTG
EST: CAAAACGGTGCGAGGAGTTTGATCCTACTACAGTACCCACCCTTTCACAG CTGATAGAAGAGCTTAATTATGAAGGCTCAAGAGCTGATGCTGATGGTG
genomic: CAAAACGGTGCGAGGAGTTTGATCCTACTACAGTACCCACCCTTTCACAGgtaaacttat ... aacattgcagCTGATAGAAGAGCTTAATTATGAAGGCTCAAGAGCTGATGCTGATGGTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTCGTGTTTGTGTCCCTATTGATCCAAAACGGTGCGAGGAGTTTGATCCTACTACAGTACCCACCCTTTCACAGgtaaacttattctgcaatgataatttttttatatgcattccagggagagaaaaactttccttgggctcaattatttgcttagttttcaataaggatgttt
- - - - - - - - - - - - - - - - - GAGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - gagaaaaa