1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' |
ATATGGTCTTAATCAGACAATAGGCCCTGTGTCAATTTCCACCCTTTCTAATGGTGGAATAGACGAGTCTGGTGGATCAGCTCCTTGGGGAAGGGATCAGgtcctctatttcattatcttatttcttcttcctattcaatattttactgtatgctgattttaatctgaacacaacag
species | Glycine max |
transcript | GLYMA02G39040.1 |
intron # | 13 |
splice site | 5' |
intron type | U2 |
EST: ATGGTGGAATAGACGAGTCTGGTGGATCAGCTCCTTGGGGAAGGGATCAG GGACACCTTGTTGATCTAGTTCAAAGAGAGGTGAAAGCATTGCTGCAGTCTEST: gi|14259324|gb|BG882232.1|BG882232
genomic: ATGGTGGAATAGACGAGTCTGGTGGATCAGCTCCTTGGGGAAGGGATCAGgtcctctatt ... aacacaacagGGACACCTTGTTGATCTAGTTCAAAGAGAGGTGAAAGCATTGCTGCAGTCT
EST: ATGGTGGAATAGACGAGTCTGGTGGATCAGCTCCTTGGGGAAGGGATCAG GGACACCTTGTTGATCTAGTTCAAAGAGAGGTGAAAGCATTGCTGCAGTCTEST: gi|33389206|gb|CA852413.1|CA852413
genomic: ATGGTGGAATAGACGAGTCTGGTGGATCAGCTCCTTGGGGAAGGGATCAGgtcctctatt ... aacacaacagGGACACCTTGTTGATCTAGTTCAAAGAGAGGTGAAAGCATTGCTGCAGTCT
EST: ATGGTGGAATAGACGAGTCTGGTGGATCAGCTCCTTGGGGAAGGGATCAG GGACACCTTGTTGATCTAGTTCAAAGAGAGGTGAAAGCATTGCTGCAGTCTEST: gi|15815297|gb|BI787572.1|BI787572
genomic: ATGGTGGAATAGACGAGTCTGGTGGATCAGCTCCTTGGGGAAGGGATCAGgtcctctatt ... aacacaacagGGACACCTTGTTGATCTAGTTCAAAGAGAGGTGAAAGCATTGCTGCAGTCT
EST: ATGGTGGAATAGACGAGTCTGGTGGATCAGCTCCTTGGGGAAGGGATCAG GGACACCTTGTTGATCTAGTTCAAAGAGAGGTGAAAGCATTGCTGCAGTCTEST: gi|208093259|gb|GD895210.1|GD895210
genomic: ATGGTGGAATAGACGAGTCTGGTGGATCAGCTCCTTGGGGAAGGGATCAGgtcctctatt ... aacacaacagGGACACCTTGTTGATCTAGTTCAAAGAGAGGTGAAAGCATTGCTGCAGTCT
EST: ATGGTGGAATAGACGAGTCTGGTGGATCAGCTCCTTGGGGAAGGGATCAG GGACACCTTGTTGATCTAGTTCAAAGA
genomic: ATGGTGGAATAGACGAGTCTGGTGGATCAGCTCCTTGGGGAAGGGATCAGgtcctctatt ... aacacaacagGGACACCTTGTTGATCTAGTTCAAAGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATATGGTCTTAATCAGACAATAGGCCCTGTGTCAATTTCCACCCTTTCTAATGGTGGAATAGACGAGTCTGGTGGATCAGCTCCTTGGGGAAGGGATCAGgtcctctatttcattatcttatttcttcttcctattcaatattttactgtatgctgattttaatctgaacacaacag
- - - - - - - - - - - - - - - - - - - - - - - - - TGGTGG
- - - - - - - - - - - - - - - - - - - - - - - - - - GGTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGTGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TCAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGCTC