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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GCTTTCCGTGTTCTTCGAACCCTTGGCGTCACTGTGCAAATGATCTCCCAGGGTGCATCTAAGgtatcttcctaatccaatttatattatcattcattatattagctataaacaatagtagcctttttcatcctcagttgcttacattggttgttattatgtg...

Basic information

species Glycine max
transcript GLYMA02G07300.1
intron # 13
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|9898832|gb|BE607800.1|BE607800
EST:     TTCGAACCCTTGGCGTCACTGTGCAAATGATCTCCCAGGGTGCATCTAAG                         GTGAACATCTCATTGGTTGTAAATGACAGTGAAGCAGAGCAGTGTGTGAGG
genomic: TTCGAACCCTTGGCGTCACTGTGCAAATGATCTCCCAGGGTGCATCTAAGgtatcttcct ... tttgtggcagGTGAACATCTCATTGGTTGTAAATGACAGTGAAGCAGAGCAGTGTGTGAGG
EST: gi|12773695|gb|BG238622.1|BG238622
EST:     ATCTCCCATGGTGCATCTAAG                         GTGAACATCTCATTGGTTGTAAATGACAGTGAAGCAGAGCAGTGTGTGAGG
genomic: ATCTCCCAGGGTGCATCTAAGgtatcttcct ... tttgtggcagGTGAACATCTCATTGGTTGTAAATGACAGTGAAGCAGAGCAGTGTGTGAGG