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ATATTACGCACCCAACTCCTGATCTAACAGGATATATCACTGAGGGGCAGATATACATCGACAGGCAGCTGTATAATAGACAGgtgggttatgttgaagctttcagctgtaatgaacattttacaccaagttcgattaattagaagagagaatttggcacagaacgcatcctaacatttaatg...
species | Glycine max |
transcript | GLYMA20G24070.1 |
intron # | 12 |
splice site | 5' |
intron type | U2 |
EST: CGACAGGCAGCTGTATAATAGACAG ATATACCCACCAATCAACGTCCTCCCATCACTATCTCGGTTGATGAAGEST: gi|16276790|gb|BI942045.1|BI942045
genomic: CGACAGGCAGCTGTATAATAGACAGgtgggttatg ... aactgggcagATATACCCACCAATCAACGTCCTCCCATCACTATCTCGGTTGATGAAG
EST: ATATCACTGAGGGGCAGATATACATCGACAGGCAGCTGTATAATAGACAG ATATACCCACCAATCAEST: gi|21256304|gb|BQ453192.1|BQ453192
genomic: ATATCACTGAGGGGCAGATATACATCGACAGGCAGCTGTATAATAGACAGgtgggttatg ... aactgggcagATATACCCACCAATCA
EST: TATCACTGAGGGGCAGATATACATCTTACTGGCAGCTGTATAATAGACAG ATATACCCACCAATCAACGTCCTCCCATCACTATCTCGGTTGATGAAGEST: gi|193476671|gb|FK439532.1|FK439532
genomic: TATCACTGAGGGGCAGATATACATC-GACAGGCAGCTGTATAATAGACAGgtgggttatg ... aactgggcagATATACCCACCAATCAACGTCCTCCCATCACTATCTCGGTTGATGAAG
EST: ATATCACTGAGGGGCAGATATACATCGACAGGCAGCTGTATAATAGACAG ATATACCCACCAATCAACGTCCTCCCAEST: gi|16279439|gb|BI943437.1|BI943437
genomic: ATATCACTGAGGGGCAGATATACATCGACAGGCAGCTGTATAATAGACAGgtgggttatg ... aactgggcagATATACCCACCAATCAACGTCCTCCCA
EST: ATATCACTGAGGGGCAGATATACATCGACAGGCAGCTGTATAATAGACAG ATATACCCACCAATCAACGTCCTCCCATCACTATCTCAGTTGATGAAGEST: gi|16276744|gb|BI942021.1|BI942021
genomic: ATATCACTGAGGGGCAGATATACATCGACAGGCAGCTGTATAATAGACAGgtgggttatg ... aactgggcagATATACCCACCAATCAACGTCCTCCCATCACTATCTCGGTTGATGAAG
EST: ATATCACTGAGGGGCAGATATACATCGACAGGCAGCTGTATAATAGACAG ATATACCCACCAATCAACGTCCTCCCATCACTATCTCGGTTGATGAAGEST: gi|37996030|gb|CF807619.1|CF807619
genomic: ATATCACTGAGGGGCAGATATACATCGACAGGCAGCTGTATAATAGACAGgtgggttatg ... aactgggcagATATACCCACCAATCAACGTCCTCCCATCACTATCTCGGTTGATGAAG
EST: TGAGGGGCAGATATACATCGACAGGCAGCTGTATAATAGACAG ATATACCCACCAATCAACGTCCTCCCATCACTATCTCGGTTGATGAAGEST: gi|16278548|gb|BI942962.1|BI942962
genomic: TGAGGGGCAGATATACATCGACAGGCAGCTGTATAATAGACAGgtgggttatg ... aactgggcagATATACCCACCAATCAACGTCCTCCCATCACTATCTCGGTTGATGAAG
EST: ATATCACTGAGGGGCAGATATACATCGACAGGCAGCTGTATAATAGACAG ATATACCCACCAATCAACGTGCTCCCATCACTATCTCGGTTGATGAAGEST: gi|21601974|gb|BQ612305.1|BQ612305
genomic: ATATCACTGAGGGGCAGATATACATCGACAGGCAGCTGTATAATAGACAGgtgggttatg ... aactgggcagATATACCCACCAATCAACGTCCTCCCATCACTATCTCGGTTGATGAAG
EST: GGCAGCTGTATAATAGACAG ATATACCCACCAATCAACGTCCTCCCATCACTATCTCGGTTGATGAAGEST: gi|19346883|gb|BM891771.1|BM891771
genomic: GGCAGCTGTATAATAGACAGgtgggttatg ... aactgggcagATATACCCACCAATCAACGTCCTCCCATCACTATCTCGGTTGATGAAG
EST: ATATCACTGAGGGGCAGATATACATCGACAGGCAGCTGTATAATAGACAG ATATACCCACCAATCAACGTCCTCCCA
genomic: ATATCACTGAGGGGCAGATATACATCGACAGGCAGCTGTATAATAGACAGgtgggttatg ... aactgggcagATATACCCACCAATCAACGTCCTCCCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATATTACGCACCCAACTCCTGATCTAACAGGATATATCACTGAGGGGCAGATATACATCGACAGGCAGCTGTATAATAGACAGgtgggttatgttgaagctttcagctgtaatgaacattttacaccaagttcgattaattagaagagagaatttggcacagaacgcatcctaacatttaatg
- - - - - - - - - - - - - - - - - - - - - - - GCAGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGCTG