1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
AGCGGCATGAAGAGCCCAAAATTGCAACCGATGAATATGAGCAGGGAACTTATGTGTACTTTGATTTCCATATTGCAAATGATGACATGCAACATGGATGgtatgctgaataaacttataattcctgatatttgctgtcataatttattaattttagcatatgtggacaataataccatacattgtttgattttgcacttctgtttctgctgacttgtgtgtatcttgatgtggttattcag
species | Glycine max |
transcript | GLYMA19G28580.2 |
intron # | 12 |
splice site | 5' |
intron type | U2 |
EST: TATGTGTACTTTGATTTCCATATTGCAAATGATGACATGCAACATGGATG GTGTCAAAGAATCAAGACTGAATTEST: gi|8402502|gb|BE058136.1|BE058136
genomic: TATGTGTACTTTGATTTCCATATTGCAAATGATGACATGCAACATGGATGgtatgctgaa ... ggttattcagGTGTCAAAGAATCAAGACTGAATT
EST: TATGTGTACTTTGATTTCCATATTGCAAATGATGACATGCAACATGGATG GTGTCAAAGAATCAAGACTGAATTCACTTTTGAGTATAATTATCTTGAAGAEST: gi|22929218|gb|BU546357.1|BU546357
genomic: TATGTGTACTTTGATTTCCATATTGCAAATGATGACATGCAACATGGATGgtatgctgaa ... ggttattcagGTGTCAAAGAATCAAGACTGAATTCACTTTTGAGTATAATTATCTTGAAGA
EST: TATGTGTACTTTGATTTCCATATTGCAAATGATGACATGCAACATGGATG GTGTCAAAGAATCAAGACTGAATTCACTTTTGAGTATAATTATCTTGAAGA
genomic: TATGTGTACTTTGATTTCCATATTGCAAATGATGACATGCAACATGGATGgtatgctgaa ... ggttattcagGTGTCAAAGAATCAAGACTGAATTCACTTTTGAGTATAATTATCTTGAAGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AGCGGCATGAAGAGCCCAAAATTGCAACCGATGAATATGAGCAGGGAACTTATGTGTACTTTGATTTCCATATTGCAAATGATGACATGCAACATGGATGgtatgctgaataaacttataattcctgatatttgctgtcataatttattaattttagcatatgtggacaataataccatacattgtttgattttgcacttctgtttctgctgacttgtgtgtatcttgatgtggttattcag
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