1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
GGTGGTGAGGTGGCAAATCAGCCAGTGCATATGCCGTTGATTTTGCCTAAAGTTCCTGGTCGGTTCTACTATTATTTTGGAAAACCATTGGAAATGGAAGgtatactaaatgcatatttacagcttggtatgtccatgaaaaatggtgctaaaaatggtttttccttcttaaaattaatgagatatttttgacag
species | Glycine max |
transcript | GLYMA19G27200.1 |
intron # | 12 |
splice site | 5' |
intron type | U2 |
EST: AGTTCCTGGTCGGTTCTACTATTATTTTGGAAAACCATTGGAAATGGAAG GGAGGAAACAAGAACTGAGAGACAGGAAGAAAGCTCATGAGATTTATTTACEST: gi|214005477|gb|DB989167.1|DB989167
genomic: AGTTCCTGGTCGGTTCTACTATTATTTTGGAAAACCATTGGAAATGGAAGgtatactaaa ... tttttgacagGGAGGAAACAAGAACTGAGAGACAGGAAGAAAGCTCATGAGATTTATTTAC
EST: AGTTCCTGGTCGGTTCTACTATTATTTTGGAAAACCATTGGAAATGGAAG GGAGGAAACAAGAACTGAGAGACAGGAAGAAAGCTCATGAGATTTATTTACEST: gi|151398463|gb|EV268334.1|EV268334
genomic: AGTTCCTGGTCGGTTCTACTATTATTTTGGAAAACCATTGGAAATGGAAGgtatactaaa ... tttttgacagGGAGGAAACAAGAACTGAGAGACAGGAAGAAAGCTCATGAGATTTATTTAC
EST: CTACTATTATTTTGGAAAACCATTGGAAATGGAAG GGAGGAAACAAGAACTGAGAGACAGGAAGAAAGCTCATGAGATTTATTTACEST: gi|209709678|gb|BW657207.1|BW657207
genomic: CTACTATTATTTTGGAAAACCATTGGAAATGGAAGgtatactaaa ... tttttgacagGGAGGAAACAAGAACTGAGAGACAGGAAGAAAGCTCATGAGATTTATTTAC
EST: AGTTCCTGGTCGGTTCTACTATTATTTTGGAAAACCATTGGAAATGGAAG GGAGGAAACAAGAACTGAGAGACAGGAAGAAAGCTCATGAGATTTATTTACEST: gi|58014697|gb|CX701439.1|CX701439
genomic: AGTTCCTGGTCGGTTCTACTATTATTTTGGAAAACCATTGGAAATGGAAGgtatactaaa ... tttttgacagGGAGGAAACAAGAACTGAGAGACAGGAAGAAAGCTCATGAGATTTATTTAC
EST: GGTCGGTTCTACTATTATTTTGGAAAACCATTGGAAATGGAAG GGAGGAAACAAGAACTGAGAGACAGGAAGAAAGCTCATGAGATTTATTTACEST: gi|58017660|gb|CX704402.1|CX704402
genomic: GGTCGGTTCTACTATTATTTTGGAAAACCATTGGAAATGGAAGgtatactaaa ... tttttgacagGGAGGAAACAAGAACTGAGAGACAGGAAGAAAGCTCATGAGATTTATTTAC
EST: AGTTCCTGGTCGGTTCTACTATTATTTTGGAAAACCATTGGAAATGGAAG GGAGGAAACAAGAACTGAGAGACAGGAAGAAAGCTCATGAGATTTATTTAC
genomic: AGTTCCTGGTCGGTTCTACTATTATTTTGGAAAACCATTGGAAATGGAAGgtatactaaa ... tttttgacagGGAGGAAACAAGAACTGAGAGACAGGAAGAAAGCTCATGAGATTTATTTAC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGTGGTGAGGTGGCAAATCAGCCAGTGCATATGCCGTTGATTTTGCCTAAAGTTCCTGGTCGGTTCTACTATTATTTTGGAAAACCATTGGAAATGGAAGgtatactaaatgcatatttacagcttggtatgtccatgaaaaatggtgctaaaaatggtttttccttcttaaaattaatgagatatttttgacag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAAG