1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
AATACCCAGACAACCTTGAGATTGCTGCGGAACTTGCAGTGTCAAGCTTGCAGGtatttattttcttgatgtgtgccatttaatcttattatgttttttcttcttctgatattgtgcaagtacttttggattaacaaaggccctctatcattca...
species | Glycine max |
transcript | GLYMA18G04360.1 |
intron # | 12 |
splice site | 5' |
intron type | U2 |
EST: GAGATTGCTGCGGAACCTGCAGTGTCAAGCTTGCAGG CAGTTTTGCACAGGACACTCAGTGACTACAAAAGTGCTGGACATGATCCTGEST: gi|213607516|gb|DB976618.1|DB976618
genomic: GAGATTGCTGCGGAACTTGCAGTGTCAAGCTTGCAGGtatttatttt ... tatgtgcaggCAGTTTTGCACAGGACACTCAGTGACTACAAAAGTGCTGGACATGATCCTG
EST: CCCAGACAACCTTGAGATTGCTGCGGAACTTGCAGTGTCAAGCTTGCAGG CAGTTTTGCACAGGACACTCAGTGACTACAAAAGTGCTGGACATGATCCTGEST: gi|22929873|gb|BU547012.1|BU547012
genomic: CCCAGACAACCTTGAGATTGCTGCGGAACTTGCAGTGTCAAGCTTGCAGGtatttatttt ... tatgtgcaggCAGTTTTGCACAGGACACTCAGTGACTACAAAAGTGCTGGACATGATCCTG
EST: CCCAGACAACCTTGAGATTGCTGCGGAACTTGCAGTGTCAAGCTTGCAGG CAGTTTTGCACAGGACACTCAGTGACTACAAAAGTGCTGGACATGATCCTGEST: gi|22541669|gb|BU091512.1|BU091512
genomic: CCCAGACAACCTTGAGATTGCTGCGGAACTTGCAGTGTCAAGCTTGCAGGtatttatttt ... tatgtgcaggCAGTTTTGCACAGGACACTCAGTGACTACAAAAGTGCTGGACATGATCCTG
EST: CCCAGACAACCTTGAGATTGCTGCGGAACTTGCAGTGTCAAGCTTGCAGG CAGTTTTGCACAGGACACTCAGTGACTACTATAGTGCTGGACATGATCCTGEST: gi|192332258|gb|FK023907.1|FK023907
genomic: CCCAGACAACCTTGAGATTGCTGCGGAACTTGCAGTGTCAAGCTTGCAGGtatttatttt ... tatgtgcaggCAGTTTTGCACAGGACACTCAGTGACTACAAAAGTGCTGGACATGATCCTG
EST: CCCAGACAACCTTGAGATTGCTGCGGAACTTGCAGTGTCAAGCTTGCAGG CAGTTTTGCACAGGACACTCAGTGACTACAAAAGTGCTGGACATGATCCTG
genomic: CCCAGACAACCTTGAGATTGCTGCGGAACTTGCAGTGTCAAGCTTGCAGGtatttatttt ... tatgtgcaggCAGTTTTGCACAGGACACTCAGTGACTACAAAAGTGCTGGACATGATCCTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AATACCCAGACAACCTTGAGATTGCTGCGGAACTTGCAGTGTCAAGCTTGCAGGtatttattttcttgatgtgtgccatttaatcttattatgttttttcttcttctgatattgtgcaagtacttttggattaacaaaggccctctatcattca
- - - - - - - - - - - TGCTGC
- - - - - - - - - - - - - - - - - - - - - CAAGCT