1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
GTATGCCTCAGAGGGACCACTGAAAGGAATCCTTGGGTACACAGACGAGGATGTTGTCTCTAATGACTTTGTTGGTGATTCAAGgtacgttatgttcttctattacctttaacggaaagactttgctgaattacttttctggttgaaaagtgagacaccatagaaactgacatacccagtttgg...
species | Glycine max |
transcript | GLYMA16G09020.1 |
intron # | 12 |
splice site | 5' |
intron type | U2 |
EST: GGGTACACAGACGAGGATGTTGTCTCTAATGACTTTGTTGGTGATTCAAG GTCGAGTATCTTTGATGCTAAGGCTGGCATTGCGCTTAGTGCTTCCTTTGTEST: gi|208279730|gb|GE080068.1|GE080068
genomic: GGGTACACAGACGAGGATGTTGTCTCTAATGACTTTGTTGGTGATTCAAGgtacgttatg ... ttttctccagGTCGAGTATCTTTGATGCTAAGGCTGGCATTGCGCTTAGTGCTTCCTTTGT
EST: GGGTACACAGACGAGGATGTTGTCTCTAATGACTTTGTTGGTGATTCAAG GTCGAGTATCTTTGATGCTAAGGCTGGCATTGCGCTTAGTGCTTCCTTTGTEST: gi|192334303|gb|FK024402.1|FK024402
genomic: GGGTACACAGACGAGGATGTTGTCTCTAATGACTTTGTTGGTGATTCAAGgtacgttatg ... ttttctccagGTCGAGTATCTTTGATGCTAAGGCTGGCATTGCGCTTAGTGCTTCCTTTGT
EST: GGGTACACAGACGAGGATGTTGTCTCTAATGACTTTGTTGGTGATTCAAG GTCGAGTATCTTTGATGCTAAGGCTGGCATTGCGCTTAGTGCTTCCTTTGTEST: gi|254326011|gb|GR838892.1|GR838892
genomic: GGGTACACAGACGAGGATGTTGTCTCTAATGACTTTGTTGGTGATTCAAGgtacgttatg ... ttttctccagGTCGAGTATCTTTGATGCTAAGGCTGGCATTGCGCTTAGTGCTTCCTTTGT
EST: GGGTACACAGACGAGGATGTTGTCTCTAATGACTTTGTTGGTGATTCAAG GTCGAGTATCTTTGATGCTAAGGCTGGCATTGCGCTTAGTGCTTCCTTTGT
genomic: GGGTACACAGACGAGGATGTTGTCTCTAATGACTTTGTTGGTGATTCAAGgtacgttatg ... ttttctccagGTCGAGTATCTTTGATGCTAAGGCTGGCATTGCGCTTAGTGCTTCCTTTGT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTATGCCTCAGAGGGACCACTGAAAGGAATCCTTGGGTACACAGACGAGGATGTTGTCTCTAATGACTTTGTTGGTGATTCAAGgtacgttatgttcttctattacctttaacggaaagactttgctgaattacttttctggttgaaaagtgagacaccatagaaactgacatacccagtttgg
- - - - - - - - - - - - - - - - - - - - - - - GAGGAT
- - - - - - - - - - - - - - - - - - - - - - - AGGATG