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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GCCTTTCATGTTCTTCGAACTCTTGGGGTCACTGTTCAAATGATCTCTCAGGGTGCATCTAAGgtatgcactttataaactttcgatgtttctacgttatagttggctagtcgctgtttagaaattattagcttgtttatcctcagtcacttagcatgtgtta...

Basic information

species Glycine max
transcript GLYMA16G05380.1
intron # 12
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|51337971|gb|CO981837.1|CO981837
EST:     TTCGAACTCTTGGGGTCACTGTTCAAATGATCTCTCAGGGTGCATCTAAG                         GTGAATATCTCGTTAGTTGTAAATGACAGTGAAGCAGAGCAGTGTGTCAGG
genomic: TTCGAACTCTTGGGGTCACTGTTCAAATGATCTCTCAGGGTGCATCTAAGgtatgcactt ... ttcccgccagGTGAATATCTCGTTAGTTGTAAATGACAGTGAAGCAGAGCAGTGTGTCAGG
EST: gi|22928083|gb|BU545222.1|BU545222
EST:     GTGCATCTAAG                         GTGAATATCTCGTTAGTTGTAAATGACAGTGAAGCAGAGCAGTGTGTCAGG
genomic: GTGCATCTAAGgtatgcactt ... ttcccgccagGTGAATATCTCGTTAGTTGTAAATGACAGTGAAGCAGAGCAGTGTGTCAGG