1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
TGCCCTCGTGAGCCATTTTCAAAATTCAAGTCTGATGAATGAAGATAAGCGATGTCGTCCTATTCTCTTCCACTCCGAGGGTTCTGAAGTTTGTGATCTGgtaattggaaaacattgactagtgcatttgttatattttcttcacaggaaattgaaatttgaaacttgtaggtatttactacccccttttgaagataatg...
species | Glycine max |
transcript | GLYMA15G23420.1 |
intron # | 12 |
splice site | 5' |
intron type | U2 |
EST: GTTTGTGATCTG ATTGTACAAGACCACCACCTTCCCTCCAACTCCAACAATCTAAACATTCAGEST: gi|12690524|gb|BG156860.1|BG156860
genomic: GTTTGTGATCTGgtaattggaa ... cttcctgtagATTGTACAAGACCACCACCTTCCCTCCAACTCCAACAATCTAAACATTCAG
EST: GATGTCGTCCTATTCTCTTCCACTCCGAGGGTTCTGAAGTTTGTGATCTG ATTGTACAAGACCACCACCTTCCCTCCAACTCCAACAATCTAAACATTCAGEST: gi|5677251|gb|AI938381.1|AI938381
genomic: GATGTCGTCCTATTCTCTTCCACTCCGAGGGTTCTGAAGTTTGTGATCTGgtaattggaa ... cttcctgtagATTGTACAAGACCACCACCTTCCCTCCAACTCCAACAATCTAAACATTCAG
EST: TTTGTCGGCCTATTCTCTTCCACTCCGAGGGTTCTGAAGTTTGTGATCTG ATTGTACAAGACCACCACCTTCCCTCCAACTCCAACAATCTAAACATTCAGEST: gi|15201649|gb|BI424984.1|BI424984
genomic: GATGTCGTCCTATTCTCTTCCACTCCGAGGGTTCTGAAGTTTGTGATCTGgtaattggaa ... cttcctgtagATTGTACAAGACCACCACCTTCCCTCCAACTCCAACAATCTAAACATTCAG
EST: GTTTGTGATCTG ATTGTACAAGACCACCACCTTCCCTCCAACTCCAACAATCTAAACATTCAGEST: gi|9259934|gb|BE348081.1|BE348081
genomic: GTTTGTGATCTGgtaattggaa ... cttcctgtagATTGTACAAGACCACCACCTTCCCTCCAACTCCAACAATCTAAACATTCAG
EST: GATGTCGTCCTATTCTCTTCCACTCCGAGGGTTCTGAAGTTTGTGATCTG ATTGTACAAGACCACCACCTTCCCTCCAACTCCAACAATCTAAACATTCAGEST: gi|9899334|gb|BE608302.1|BE608302
genomic: GATGTCGTCCTATTCTCTTCCACTCCGAGGGTTCTGAAGTTTGTGATCTGgtaattggaa ... cttcctgtagATTGTACAAGACCACCACCTTCCCTCCAACTCCAACAATCTAAACATTCAG
EST: GATGTCGTCCTATTCTCTTCCACTCCGAGGGTTCTGAAGTTTGTGATCTG ATTGTACAAGACCACCACCTTCCCTCCAACTCCAACAATCTAAACATTCAG
genomic: GATGTCGTCCTATTCTCTTCCACTCCGAGGGTTCTGAAGTTTGTGATCTGgtaattggaa ... cttcctgtagATTGTACAAGACCACCACCTTCCCTCCAACTCCAACAATCTAAACATTCAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGCCCTCGTGAGCCATTTTCAAAATTCAAGTCTGATGAATGAAGATAAGCGATGTCGTCCTATTCTCTTCCACTCCGAGGGTTCTGAAGTTTGTGATCTGgtaattggaaaacattgactagtgcatttgttatattttcttcacaggaaattgaaatttgaaacttgtaggtatttactacccccttttgaagataatg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ggaaaaca
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ctacccc