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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTAAAACAATGTCAACTCTTACAAACCATAAAAAATCTGTTCGAGCAATGGCCCAGCATCCCAAAGAgtatgtgtttgatatcagttgattattacttgtggaattataaaatatggttggttagttaaatttgttattctattttgtcttatcaccctcttattttttttgttggctgcag

Basic information

species Glycine max
transcript GLYMA15G15960.2
intron # 12
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|254319813|gb|GR829217.1|GR829217
EST:     CTTACAAACCATAAAAAATCTGTTCGAGCAATGGCCCAGCATCCCAAAGA                         GCAAGCTTTTGCATCTGCTTCAGCTGACAATATTAAAAAGTTCAACCTTCC
genomic: CTTACAAACCATAAAAAATCTGTTCGAGCAATGGCCCAGCATCCCAAAGAgtatgtgttt ... ttggctgcagGCAAGCTTTTGCATCTGCTTCAGCTGACAATATTAAAAAGTTCAACCTTCC
EST: gi|21993683|gb|BQ785211.1|BQ785211
EST:     CTTACAAACCATAAAAAATCTGTTCGAGCAATGGCCCAGCATCCCAAAGA                         GCAAGCTTTTGCATCTGCTTCAGCTGACAATATTAAAAAGTTCAACCTTCC
genomic: CTTACAAACCATAAAAAATCTGTTCGAGCAATGGCCCAGCATCCCAAAGAgtatgtgttt ... ttggctgcagGCAAGCTTTTGCATCTGCTTCAGCTGACAATATTAAAAAGTTCAACCTTCC
EST: gi|37994708|gb|CF806333.1|CF806333
EST:     CTTACAAACCATAAAAAATCTGTTCGAGCAATGGCCCAGCATCCCAAAGA                         GCAAGCTTTTGCATCTGCTTCAGCTGACAATATTAAAAAGTTCAACCTTCC
genomic: CTTACAAACCATAAAAAATCTGTTCGAGCAATGGCCCAGCATCCCAAAGAgtatgtgttt ... ttggctgcagGCAAGCTTTTGCATCTGCTTCAGCTGACAATATTAAAAAGTTCAACCTTCC
EST: gi|193520683|gb|FK482048.1|FK482048
EST:     CTTACAAACCATAAAAAATCTGTTCGAGCAATGGCCCAGCATCCCAAAGA                         GCAAGCTTTTGCAT
genomic: CTTACAAACCATAAAAAATCTGTTCGAGCAATGGCCCAGCATCCCAAAGAgtatgtgttt ... ttggctgcagGCAAGCTTTTGCAT