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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGTTGAAATTGACACCCTGACTGGAGATTTTCACACCAGAGTGGCAAACGTATTTTTGGATCTAGGTTATTCTCTGAATCCAGCAATAGATGTTGGACAGgtactttttttttctttaattgtttattattcatttttagttattaatttcagaatatacaaggaagtttatcaaggatggagaaacactacacagagga...

Basic information

species Glycine max
transcript GLYMA15G03870.1
intron # 12
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA15G03870.1 (Glycine max), 5'ss of exon 12
lower sequence: Vv06s0004g02030.t01 (Vitis vinifera), 5'ss of exon 12
GGTTGAAATTGACACCCTGACTGGAGATTTTCACACCAGAGTGGCAAACGTATTTTTGGATCTAGGTTATTCTCTGAATCCAGCAATAGATGTTGGACAGgtactttttttttctttaattgtttattattcatttttagttattaatttcagaatatacaaggaagtttatcaaggatggagaaacactacacagagga------
|||||||||||| ||  |||| |||||||||||||| || |||||||| || || |||||||| ||  ||||  | |||||||| || |||||||||||||| |||||| ||||| |     | || | ||  ||| | |  |||  ||||| | |     || | ||| | |  | ||          | ||  ||  |      
GGTTGAAATTGATACATTGACAGGAGATTTTCACACTAGGGTGGCAAATGTTTTCTTGGATCTTGGACATTCGATAAATCCAGCCATTGATGTTGGACAGgtgctttttctttctat-----tctactcttt-tttctggacattgttttcaaatttatttagaatgttcaacctgtattatatgctgtttcaatgaaaatattat