1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
ATTCTAAGTTCTGGAATGAGTTTGGTAAATCCATTAAACTTGGTATCATCGAGGATGCCACCAACAGAAATCGTTTGGCAAAACTGCTCAGATTTGAGAGgtatattacttctgcatgtaattattaaactcttggggtagtgttatttcctcacttccattatttaacattttggctgatacttgtaactcttgcag
species | Glycine max |
transcript | GLYMA14G40320.1 |
intron # | 12 |
splice site | 5' |
intron type | U2 |
EST: GAGGATGCCACCAACAGAAATCGTTTGGCAAAACTGCTCAGATTTGAGAG CACCAAGTCTGAGGGTAAATTGACATCTCTGGATCAGTACATATCTAGAATEST: gi|192301679|gb|FG997621.1|FG997621
genomic: GAGGATGCCACCAACAGAAATCGTTTGGCAAAACTGCTCAGATTTGAGAGgtatattact ... actcttgcagCACCAAGTCTGAGGGTAAATTGACATCTCTGGATCAGTACATATCTAGAAT
EST: GAGGATGCCACCAACAGAAATCGTTTGGCAAAACTGCTCAGATTTGAGAG CACCAAGTCTGAGGGTAAATTGACATCTCTGGATCAGTACATATCTAGAATEST: gi|193550593|gb|FK508890.1|FK508890
genomic: GAGGATGCCACCAACAGAAATCGTTTGGCAAAACTGCTCAGATTTGAGAGgtatattact ... actcttgcagCACCAAGTCTGAGGGTAAATTGACATCTCTGGATCAGTACATATCTAGAAT
EST: GAGGATGCCACCAACAGAAATCGTTTGGCAAAACTGCTCAGATTTGAGAG CACCAAGTCTGAGGGTAAATTGACATCTCTGGATCAGTACATATCTAGAATEST: gi|192313365|gb|FK005137.1|FK005137
genomic: GAGGATGCCACCAACAGAAATCGTTTGGCAAAACTGCTCAGATTTGAGAGgtatattact ... actcttgcagCACCAAGTCTGAGGGTAAATTGACATCTCTGGATCAGTACATATCTAGAAT
EST: GAGGATGCCACCAACAGAAATCGTTTGGCAAAACTGCTCAGATTTGAGAG CACCAAGTCTGAGGGTAAATTGACATCTCTGGATCAGTACATATCTAGAATEST: gi|192313364|gb|FK005136.1|FK005136
genomic: GAGGATGCCACCAACAGAAATCGTTTGGCAAAACTGCTCAGATTTGAGAGgtatattact ... actcttgcagCACCAAGTCTGAGGGTAAATTGACATCTCTGGATCAGTACATATCTAGAAT
EST: GAGGATGCCACCAACAGAAATCGTTTGGCAAAACTGCTCAGATTTGAGAG CACCAAGTCTGAGGGTAAATTGACATCTCTGGATCAGTACATATCTAGAATEST: gi|193593679|gb|FK546687.1|FK546687
genomic: GAGGATGCCACCAACAGAAATCGTTTGGCAAAACTGCTCAGATTTGAGAGgtatattact ... actcttgcagCACCAAGTCTGAGGGTAAATTGACATCTCTGGATCAGTACATATCTAGAAT
EST: GAGGATGCCACCAACAGAAATCGTTTGGCAAAACTGCTCAGATTTGAGAG CACCAAGTCTGAGGGTAAATTGACATCTCTGGATCAGTACATATCTAGAATEST: gi|7925492|gb|AW831518.1|AW831518
genomic: GAGGATGCCACCAACAGAAATCGTTTGGCAAAACTGCTCAGATTTGAGAGgtatattact ... actcttgcagCACCAAGTCTGAGGGTAAATTGACATCTCTGGATCAGTACATATCTAGAAT
EST: GAGGATGCCACCAACAGAAATCGTTTGGCAAAACTGCTCAGATTTGAGAG CACCAAGTCTGAGGGTAAATTGACATCTCTGGATCAGTACATATCTAGAATEST: gi|208076518|gb|GD874383.1|GD874383
genomic: GAGGATGCCACCAACAGAAATCGTTTGGCAAAACTGCTCAGATTTGAGAGgtatattact ... actcttgcagCACCAAGTCTGAGGGTAAATTGACATCTCTGGATCAGTACATATCTAGAAT
EST: GAGGATGCCACCAACAGAAATCGTTTGGCAAAACTGCTCAGATTTGAGAG CACCAAGTCTGAGGGTAAATTGACATCTCTGGATCAGTACATATCTAGAATEST: gi|208324369|gb|GE120588.1|GE120588
genomic: GAGGATGCCACCAACAGAAATCGTTTGGCAAAACTGCTCAGATTTGAGAGgtatattact ... actcttgcagCACCAAGTCTGAGGGTAAATTGACATCTCTGGATCAGTACATATCTAGAAT
EST: GAGGATGCCACCAACAGAAATCGTTTGGCAAAACTGCTCAGATTTGAGAG CACCAAGTCTGAGGGTAAATTGACATCTCTGGATCAGTACATATCTAGAATEST: gi|23059035|gb|BU578351.1|BU578351
genomic: GAGGATGCCACCAACAGAAATCGTTTGGCAAAACTGCTCAGATTTGAGAGgtatattact ... actcttgcagCACCAAGTCTGAGGGTAAATTGACATCTCTGGATCAGTACATATCTAGAAT
EST: GAGGATGCCACCAACAGAAATCGTTTGGCAAAACTGCTCAGATTTGAGAG CACCAAGTCTGAGGGTAAATTGACATCTC
genomic: GAGGATGCCACCAACAGAAATCGTTTGGCAAAACTGCTCAGATTTGAGAGgtatattact ... actcttgcagCACCAAGTCTGAGGGTAAATTGACATCTC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATTCTAAGTTCTGGAATGAGTTTGGTAAATCCATTAAACTTGGTATCATCGAGGATGCCACCAACAGAAATCGTTTGGCAAAACTGCTCAGATTTGAGAGgtatattacttctgcatgtaattattaaactcttggggtagtgttatttcctcacttccattatttaacattttggctgatacttgtaactcttgcag
- - - - - - - - - - - - - - - - - - - - - - - - - GAGGAT
- - - - - - - - - - - - - - - - - - - - - - - - - AGGATG