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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TGATACTGTTATTGCCTTGGCTAGTGGGTTGTCTGGGCTTGGTTGCATATCTTCTCTAGACAGTGATGAGGCTATTCAACTTCAGGCATGCCTAGATGCGgtaaagttgaccttgtaccatactacaatttcatcactattttgtcatctcatattttcattcttttcctttgaacaaactaatatattgatgtacttaa...

Basic information

species Glycine max
transcript GLYMA13G19450.1
intron # 12
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|16281999|gb|BI944782.1|BI944782
EST:     CTTCTCTAGACAGTGATGAGGCTATTCAACTTCAGGCATGCCTAGATGCG                         GTAATGCAAGGTCTTGCCAAATCAATAGCTTGGGATGGGG
genomic: CTTCTCTAGACAGTGATGAGGCTATTCAACTTCAGGCATGCCTAGATGCGgtaaagttga ... ttctttccagGTAATGCAAGGTCTTGCCAAATCAATAGCTTGGGATGGGG
EST: gi|16277260|gb|BI942288.1|BI942288
EST:     CTTCTCTAGACAGTGATGAGGCTATTCAACTTCAGGCATGCCTAGATGCG                         GTAATGCAAGGTCTTGCCAAATCAATAGCTTGGGATGGGGAAGGAGCAACA
genomic: CTTCTCTAGACAGTGATGAGGCTATTCAACTTCAGGCATGCCTAGATGCGgtaaagttga ... ttctttccagGTAATGCAAGGTCTTGCCAAATCAATAGCTTGGGATGGGGAAGGAGCAACA