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ACCAGTGGCAGTAATGGTGACATTTCCACTGCAAATGGATTGAATTCCAGACAGCAAATTACACCCAGAGAAAATGCTGGAGATTCTTTGACAGATGCCGgtttgttactttttctcaacctaaagctttcataactccttttttttcctgaggaagttaattgtccactcgagcaaaacatttttagctggggaaatca...
species | Glycine max |
transcript | GLYMA12G29270.1 |
intron # | 12 |
splice site | 5' |
intron type | U2 |
EST: ACAGCAAATTACACCCAGAGAAAATGCTGGAGATTCTTTGACAGATGCCG CTCCTTTGCTTCCTGGTATGAATGATGTTAGATCTGAAAAGGCAAGTAGGCEST: gi|193683007|gb|FK620941.1|FK620941
genomic: ACAGCAAATTACACCCAGAGAAAATGCTGGAGATTCTTTGACAGATGCCGgtttgttact ... acatatgcagCTCCTTTGCTTCCTGGTATGAATGATGTTAGATCTGAAAAGGCAAGTAGGC
EST: ACAGCAAATTACACCCAGAGAAAATGCTGGAGATTCTTTGACAGATGCCG CTCCTTTGCTTCCTGGTATGAATGATGTTAGATCTGAAAAGGCAAGTAGGCEST: gi|208048843|gb|GD848838.1|GD848838
genomic: ACAGCAAATTACACCCAGAGAAAATGCTGGAGATTCTTTGACAGATGCCGgtttgttact ... acatatgcagCTCCTTTGCTTCCTGGTATGAATGATGTTAGATCTGAAAAGGCAAGTAGGC
EST: ACAGCAAATTACACCCAGAGAAAATGCTGGAGATTCTTTGACAGATGCCG CTCCTTTGCTTCCTGGTATGAATGATGTTAGATCTGAAAAGGCAAGTAGGCEST: gi|9565441|gb|BE474950.1|BE474950
genomic: ACAGCAAATTACACCCAGAGAAAATGCTGGAGATTCTTTGACAGATGCCGgtttgttact ... acatatgcagCTCCTTTGCTTCCTGGTATGAATGATGTTAGATCTGAAAAGGCAAGTAGGC
EST: ACAGCAAATTACACCCAGAGAAAATGCTGGAGATTCTTTGACAGATGCCG CTCCTTTGCTTCCTGGTATGAATGATGTTAGATCTGAAAAGGCAAGTAGGCEST: gi|208318163|gb|GE110644.1|GE110644
genomic: ACAGCAAATTACACCCAGAGAAAATGCTGGAGATTCTTTGACAGATGCCGgtttgttact ... acatatgcagCTCCTTTGCTTCCTGGTATGAATGATGTTAGATCTGAAAAGGCAAGTAGGC
EST: ACAGCAAATTACACCCAGAGAAAATGCTGGAGATTCTTTGACAGATGCCG CTCCTTTGCTTCCTGGTATGAAATGATEST: gi|31471144|gb|CD413172.1|CD413172
genomic: ACAGCAAATTACACCCAGAGAAAATGCTGGAGATTCTTTGACAGATGCCGgtttgttact ... acatatgcagCTCCTTTGCTTCCTGGTATGAA-TGAT
EST: ACAGCAAATTACACCCAGAGAAAATGCTGGAGATTCTTTGACAGATGCCG CTCCTTTGCTTCCTGGTATGAATGATGTTAGATCTGAAAAGGCAAGTAGGC
genomic: ACAGCAAATTACACCCAGAGAAAATGCTGGAGATTCTTTGACAGATGCCGgtttgttact ... acatatgcagCTCCTTTGCTTCCTGGTATGAATGATGTTAGATCTGAAAAGGCAAGTAGGC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ACCAGTGGCAGTAATGGTGACATTTCCACTGCAAATGGATTGAATTCCAGACAGCAAATTACACCCAGAGAAAATGCTGGAGATTCTTTGACAGATGCCGgtttgttactttttctcaacctaaagctttcataactccttttttttcctgaggaagttaattgtccactcgagcaaaacatttttagctggggaaatca
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ATGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGATG