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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TTCATTTTTGGGGTTTTCTTCTCTGTATTTCAAACACGTGAGAGAATCATTTGAGTCTGGCAGCCAAACTTGTCTTGCAAAAGTCTTGGGGATATATCAGgtcggtgagctgtttgttatgcatctttttcttttccattgggcaactttttctcctgttttaggcttacatgttgttccctgaaaatagttactaatag...

Basic information

species Glycine max
transcript GLYMA10G36250.1
intron # 12
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|58014763|gb|CX701505.1|CX701505
EST:     TTGAGTCTGGCAGCCAAATTTGTCTTGCAAAAGTCTTGGGGATATATCAG                         GTTACTAAAAGACACGTTAAAAGTGGAAAAGAGGTTAAATATGACCCCCTC
genomic: TTGAGTCTGGCAGCCAAACTTGTCTTGCAAAAGTCTTGGGGATATATCAGgtcggtgagc ... ctcaatacagGTTACTAAAAGACACGTTAAAAGTGGAAAAGAGGTTAAATATGACCCCCTC
EST: gi|51337238|gb|CO981104.1|CO981104
EST:     TTGAGTCTGGCAGCCAAACTTGTCTTGCAAAAGTCTTGGGGATATATCAG                         GTTACTAAAAGACACGTTAAAAGTGGAAAAGAGGTTAAATATGACCCCCTC
genomic: TTGAGTCTGGCAGCCAAACTTGTCTTGCAAAAGTCTTGGGGATATATCAGgtcggtgagc ... ctcaatacagGTTACTAAAAGACACGTTAAAAGTGGAAAAGAGGTTAAATATGACCCCCTC