1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
ATAGGAAGAATATACTAGAAGCTAAGCCCATCAAGGGAACGATAGCTCGTGGTGCTACTGAAGAGGAAGATGAGCAACTAAAATTTAAATTACAGTTCAGgtgacctatatttattattttatttatacaccactgttttaacaaatgtttctaccacattagtttaaattttggaattatttctctaaggatttttttc...
species | Glycine max |
transcript | GLYMA10G35580.1 |
intron # | 12 |
splice site | 5' |
intron type | U2 |
EST: GGTGCTACTGAAGAGGAAGATGAGCAACTAAAATTTAAATTACAGTTCAG CGAAAAGGATCAGGCTGAAAACCTGATGATTGTTGACCTTCTAAGGAATGAEST: gi|13479287|gb|BG508630.1|BG508630
genomic: GGTGCTACTGAAGAGGAAGATGAGCAACTAAAATTTAAATTACAGTTCAGgtgacctata ... tctctttcagCGAAAAGGATCAGGCTGAAAACCTGATGATTGTTGACCTTCTAAGGAATGA
EST: GGTGCTACTGAAGAGGAAGATGAGCAACTAAAATTTAAATTACAGTTCAG CGAAAAGGATCAGGCTGAAAACCTGATGATTGTTGACCTTCTAAGGAATGAEST: gi|192299583|gb|FG989994.1|FG989994
genomic: GGTGCTACTGAAGAGGAAGATGAGCAACTAAAATTTAAATTACAGTTCAGgtgacctata ... tctctttcagCGAAAAGGATCAGGCTGAAAACCTGATGATTGTTGACCTTCTAAGGAATGA
EST: GGTGCTACTGAAGAGGAAGATGAGCAACTAAAATTTAAATTACAGTTCAG CGAAAAGGATCAGGCTGAAAACCTGATGATTGTTGACCTTCTAAGGAATGAEST: gi|51336198|gb|CO980064.1|CO980064
genomic: GGTGCTACTGAAGAGGAAGATGAGCAACTAAAATTTAAATTACAGTTCAGgtgacctata ... tctctttcagCGAAAAGGATCAGGCTGAAAACCTGATGATTGTTGACCTTCTAAGGAATGA
EST: GGTGCTACTGAAGAGGAAGATGAGCAACTAAAATTTAAATTACAGTTCAG CGAAAAGGATCAGGCTGAAAACCTGATGATTGTTGACCTTCTAAGGAATGA
genomic: GGTGCTACTGAAGAGGAAGATGAGCAACTAAAATTTAAATTACAGTTCAGgtgacctata ... tctctttcagCGAAAAGGATCAGGCTGAAAACCTGATGATTGTTGACCTTCTAAGGAATGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATAGGAAGAATATACTAGAAGCTAAGCCCATCAAGGGAACGATAGCTCGTGGTGCTACTGAAGAGGAAGATGAGCAACTAAAATTTAAATTACAGTTCAGgtgacctatatttattattttatttatacaccactgttttaacaaatgtttctaccacattagtttaaattttggaattatttctctaaggatttttttc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGATG