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TGCAAAGCATTTTGAAACTGGGGAGAGTCTTCCTGAAGAAGTATATTTGAAGCTTGTTGCTGCTAGGACATTTCGAGCTGGCTCTCTAAGTCTTCGACAGgtcagtatgaatgtatttggttggctattcctttctagattttatttgaaagttgcatgtgttactctcatttacttatcaatttatgttcttgtcttgt...
species | Glycine max |
transcript | GLYMA09G33490.1 |
intron # | 12 |
splice site | 5' |
intron type | U2 |
EST: GGACATTTCGAGCTGGCTCTCTAAGTCTTCGACAG TTAAAATTCGCAAGTGTAGATCTGGAACTTCATACAAAATATGTTCCAGGGEST: gi|192298500|gb|FG988486.1|FG988486
genomic: GGACATTTCGAGCTGGCTCTCTAAGTCTTCGACAGgtcagtatga ... taatttgcagTTAAAATTCGCAAGTGTAGATCTGGAACTTCATACAAAATATGTTCCAGGG
EST: AGCTTGTTGCTGCTAGGACATTTCGAGCTGGCTCTCTAAGTCTTCGACAG TTAAAATTCGCAAGTGTAGATCTGGAACTTCATACAAAATATGTTCCAGGGEST: gi|17963650|gb|BM270397.1|BM270397
genomic: AGCTTGTTGCTGCTAGGACATTTCGAGCTGGCTCTCTAAGTCTTCGACAGgtcagtatga ... taatttgcagTTAAAATTCGCAAGTGTAGATCTGGAACTTCATACAAAATATGTTCCAGGG
EST: AGCTTGTTGCTGCTAGGACATTTCGAGCTGGCTCTCTAAGTCTTCGACAG TTAAAATTCGCAAGTGTAGATCTGGAACTTCATACAAAATATGTTCCAGGGEST: gi|254348574|gb|GR852253.1|GR852253
genomic: AGCTTGTTGCTGCTAGGACATTTCGAGCTGGCTCTCTAAGTCTTCGACAGgtcagtatga ... taatttgcagTTAAAATTCGCAAGTGTAGATCTGGAACTTCATACAAAATATGTTCCAGGG
EST: AGC-TGTTGCTGCTAGGACATTTCGAGCTGGCTCTCTAAGTCTTCGACAG TT-AAATTCGCAAGTGTAGATCTGGAACTTCATACAAAATATGTTCCAGGGEST: gi|21889700|gb|BQ742913.1|BQ742913
genomic: AGCTTGTTGCTGCTAGGACATTTCGAGCTGGCTCTCTAAGTCTTCGACAGgtcagtatga ... taatttgcagTTAAAATTCGCAAGTGTAGATCTGGAACTTCATACAAAATATGTTCCAGGG
EST: AGCTTGTTGCTGCTAGGACATTTCGAGCTGGCTCTCTTAGTCTTCGACAG TTAAAATTCGCATCTGTAGATCTGGAACTTCATACAAAATATGTTCCAGGGEST: gi|21255946|gb|BQ452834.1|BQ452834
genomic: AGCTTGTTGCTGCTAGGACATTTCGAGCTGGCTCTCTAAGTCTTCGACAGgtcagtatga ... taatttgcagTTAAAATTCGCAAGTGTAGATCTGGAACTTCATACAAAATATGTTCCAGGG
EST: AGCTTGTTGCTGCTAGGACATTTCGAGCTGGCTCTCTAAGTCTTCGACAG TTAAAATTCGCAAGTGTAGATCTGGAACTTCATACAAAATATGTTCCAGGG
genomic: AGCTTGTTGCTGCTAGGACATTTCGAGCTGGCTCTCTAAGTCTTCGACAGgtcagtatga ... taatttgcagTTAAAATTCGCAAGTGTAGATCTGGAACTTCATACAAAATATGTTCCAGGG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGCAAAGCATTTTGAAACTGGGGAGAGTCTTCCTGAAGAAGTATATTTGAAGCTTGTTGCTGCTAGGACATTTCGAGCTGGCTCTCTAAGTCTTCGACAGgtcagtatgaatgtatttggttggctattcctttctagattttatttgaaagttgcatgtgttactctcatttacttatcaatttatgttcttgtcttgt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - TGCTGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGCT