1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' |
CCCAGATACTCTATTTGACATTCAAGTCAAGCGTATCCATGAATACAAGAGGCAGCTATTAAACATCCTTGGTGTGATTTATAGATACAAGAAGCTAAAGgtatgagaaacagcctgctgtttgacagggtaaatttgtgaaatgccaatcgttctaatttaccaatattttttttacttcttttaacccatgttcataa...
species | Glycine max |
transcript | GLYMA08G45210.1 |
intron # | 12 |
splice site | 5' |
intron type | U2 |
EST: GGCAGCTATTAAACATCCTTGGTGTGATTTATAGATACAAGAAGCTAAAG GAGATGAGCCTTGAAGAACGTAAAAACACTACTCCACGCACGGTGATGATTEST: gi|10844538|gb|BF067869.1|BF067869
genomic: GGCAGCTATTAAACATCCTTGGTGTGATTTATAGATACAAGAAGCTAAAGgtatgagaaa ... actttaatagGAGATGAGCCTTGAAGAACGTAAAAACACTACTCCACGCACGGTGATGATT
EST: GGCAGCTATTAAACATCCTTGGTGTGATTTATAGATACAAGAAGCTAAAG GAGATGAGCCTTGAAGAACGTAAAAACACTACTCCACGCACGGTGATGATTEST: gi|22521900|gb|BU080711.1|BU080711
genomic: GGCAGCTATTAAACATCCTTGGTGTGATTTATAGATACAAGAAGCTAAAGgtatgagaaa ... actttaatagGAGATGAGCCTTGAAGAACGTAAAAACACTACTCCACGCACGGTGATGATT
EST: GGCAGCTATTAAACATCCTTGGTGTGATTTATAGATACAAGAAGCTAAAG GAGATGAGCCTTGAAGAACGTAAAAACACTACTCCACGCACGGTGATGATTEST: gi|26047983|gb|CA784613.1|CA784613
genomic: GGCAGCTATTAAACATCCTTGGTGTGATTTATAGATACAAGAAGCTAAAGgtatgagaaa ... actttaatagGAGATGAGCCTTGAAGAACGTAAAAACACTACTCCACGCACGGTGATGATT
EST: GGCAGCTATTAAACATCCTTGGTGTGATTTATAGATACAAGAAGCTAAAG GAGATGAGCCTTGAAGAACGTAAAAACACTACTCCACGCACGGTGATGATTEST: gi|15812555|gb|BI784830.1|BI784830
genomic: GGCAGCTATTAAACATCCTTGGTGTGATTTATAGATACAAGAAGCTAAAGgtatgagaaa ... actttaatagGAGATGAGCCTTGAAGAACGTAAAAACACTACTCCACGCACGGTGATGATT
EST: GGCAGCTATTAAACATCCTTGGTGTGATTTATAGATACAAGAAGCTAAAG GAGATGAGCCTTGAAGAACGTAAAAACACTACTCCACGCACGGTGATGATT
genomic: GGCAGCTATTAAACATCCTTGGTGTGATTTATAGATACAAGAAGCTAAAGgtatgagaaa ... actttaatagGAGATGAGCCTTGAAGAACGTAAAAACACTACTCCACGCACGGTGATGATT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CCCAGATACTCTATTTGACATTCAAGTCAAGCGTATCCATGAATACAAGAGGCAGCTATTAAACATCCTTGGTGTGATTTATAGATACAAGAAGCTAAAGgtatgagaaacagcctgctgtttgacagggtaaatttgtgaaatgccaatcgttctaatttaccaatattttttttacttcttttaacccatgttcataa
- - - - - - - - - - - - - - - - - - - - - - - - - GCAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAAGC