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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CGACCTTGATCTCTCAAAGTTGTTCAATGATTGCAAGGAGTACATAGTTACCACGTGTCAGAGTGACAGATTCAATGAGAAAATCGATGAACTTGTTCAGgtgggtaccaatacaataaaactaaagtgactttgtgaagttatatgtagctcctgatatccttttgaaacgtctctaacattgattctcaccttaagga...

Basic information

species Glycine max
transcript GLYMA08G43140.1
intron # 12
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|9901772|gb|BE610740.1|BE610740
EST:     CCACGTGTCAGAGTGACAGATTCAATGAGAAAATCGATGAACTTGTTCAG                         ATGTATGAAACAGTGGAGAAAATGTTGCTGAATCCAGATGAGGCATTGAAG
genomic: CCACGTGTCAGAGTGACAGATTCAATGAGAAAATCGATGAACTTGTTCAGgtgggtacca ... ctctttgtagATGTATGAAACAGTGGAGAAAATGTTGCTGAATCCAGATGAGGCATTGAAG
EST: gi|51336725|gb|CO980591.1|CO980591
EST:     CCACGTGTCAGAGTGACAGATTCAATGAGAAAATCGATGAACTTGTTCAG                         ATGTATGAAACAGTGGAGAAAATGTTGCTGAATCCAGATGAGGCATTGAAG
genomic: CCACGTGTCAGAGTGACAGATTCAATGAGAAAATCGATGAACTTGTTCAGgtgggtacca ... ctctttgtagATGTATGAAACAGTGGAGAAAATGTTGCTGAATCCAGATGAGGCATTGAAG